BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037587
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    71   8e-11
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]    67   1e-09
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    67   1e-09
emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]    67   1e-09
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    67   1e-09

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
 Frame = -2

Query: 423 PNSTRANRRIWMSSEKGQFTVVGAYKDIKKKYPKLNWCKFLWSSHTTPRV*GIGWKKIHG 244
           P     ++ IW  S  G  +   A+  +    P ++W K LW+++T P    I W+ +H 
Sbjct: 35  PLDETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHN 94

Query: 243 AMSTDDRLRDKMKYHMASRCCICKATEESQLHVLFHCTVTRRVWRFTTHLFEMQHLP-QE 67
            + TDD LR +  Y ++  CC C+   E+  H+   C VT ++W +     + QHL    
Sbjct: 95  KLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATD-QHLDFSS 153

Query: 66  INDILQNSKHF--SSLILDMW 10
           I +I +  +H   S+++  MW
Sbjct: 154 ILNISRMVQHVMNSAIVHIMW 174


>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
          Length = 843

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = -2

Query: 396 IWMSSEKGQFTVVGAYKDIKKKYPKLNWCKFLWSSHTTPRV*GIGWKKIHGAMSTDDRLR 217
           IW    KG+F+V   Y+ +K +   L   K +W S    R     W+ + G +ST D L 
Sbjct: 654 IWKIERKGKFSVKSYYRSLKVENNPLFPAKEVWGSRAPLRTRFFAWEAMWGKISTVDMLM 713

Query: 216 DKMKYHMASRCCICKATEESQLHVLFHCTVTRRVWRFTTHLFEMQHL-PQEINDIL 52
            +  + M +RC +CK  EES  H+L HC  TR +W      F +  + P  + ++L
Sbjct: 714 -RRGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNSVRNLL 768


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
 Frame = -2

Query: 405 NRRIWMSSEKGQFTVVGAYKDIKKKYPKLNWCKFLWSSHTTPRV*GIGWKKIHGAMSTDD 226
           +R IW  +  G+F++   YK +   +P       +W     PRV   GW+   G   T D
Sbjct: 400 DRVIWRETNCGKFSIKSLYKSLVSGHPTSFPSSAIWKVSVQPRVSFFGWEATWGKTLTLD 459

Query: 225 RLRDKMKYHMASRCCICKATEESQLHVLFHCTVTRRVWRFTTHLFEMQH-LPQEINDILQ 49
           +L+ +  + +A+RC +C+  EES  H+L HC   R +W     +F +Q  LP  + ++L 
Sbjct: 460 QLQ-RRGWALANRCYLCQRHEESIDHILLHCDKARTLWVLLFSMFGVQWVLPAMVKEMLS 518

Query: 48  --NSKHFSSLILDMWKAA 1
             N          +WKA+
Sbjct: 519 GWNGTFVGKKRKGVWKAS 536


>emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera]
          Length = 501

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = -2

Query: 396 IWMSSEKGQFTVVGAYKDIKKKYPKLNWCKFLWSSHTTPRV*GIGWKKIHGAMSTDDRLR 217
           IW    KG+F+V   Y+ +K +   L   K +W S    R     W+ + G +ST D L 
Sbjct: 312 IWKIERKGKFSVKSYYRSLKVENNPLFPAKEVWVSRAPLRTRFFAWEAVWGKISTVDMLM 371

Query: 216 DKMKYHMASRCCICKATEESQLHVLFHCTVTRRVWRFTTHLFEMQHL-PQEINDIL 52
            +  + M +RC +CK  EES  H+L HC  TR +W      F +  + P  + ++L
Sbjct: 372 -RRGWSMVNRCVLCKENEESTDHILIHCGKTRELWTVVLSSFGVVWVFPNSVRNLL 426


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
 Frame = -2

Query: 396  IWMSSEKGQFTVVGAYKDIKKKYPKLNWCKFLWSSHTTPRV*GIGWKKIHGAMSTDDRLR 217
            +W    KG F V   Y+ +K+    L   K +W S+   R     W+ + G +ST D L 
Sbjct: 1004 VWKIERKGTFKVNSYYRSLKEDNSPLFPXKEVWGSYAPLRTRFFAWEAVWGKISTIDMLM 1063

Query: 216  DKMKYHMASRCCICKATEESQLHVLFHCTVTRRVWRFTTHLFEMQH-LPQEINDIL 52
             +  + MA+RC +CK  EE+  H+L HC  TR +W      F +   LP  + ++L
Sbjct: 1064 -RRGWSMANRCNLCKENEETANHILIHCGKTRDLWNLLFSSFGVVWVLPDSVRNLL 1118