BLASTX nr result

ID: Coptis25_contig00037586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037586
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002884032.1| pentatricopeptide repeat-containing protein ...   152   3e-35
gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucu...   152   4e-35
ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223...   151   8e-35
ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204...   151   8e-35

>ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|222849346|gb|EEE86893.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/99 (70%), Positives = 80/99 (80%)
 Frame = +2

Query: 2   WSSMEGKLDLHGMHLGCVYVIMLQWIEELRSRFSDENSVIPAEIVVVCGLGKHSSVRGES 181
           W + EGKLDLHGMHLG  YVIMLQW+EE R+R SD   VIPAEI VVCG G HS+VRGES
Sbjct: 375 WDTSEGKLDLHGMHLGSAYVIMLQWMEETRNRLSDGEHVIPAEITVVCGSGNHSTVRGES 434

Query: 182 PVKSLVLEMMVRLSSPMRIDRKNIGCFVAKGKNVRNWLC 298
           PVKS++ ++M +  SPMRIDRKNIGCFVAKG  V+ WLC
Sbjct: 435 PVKSMITQIMAQTRSPMRIDRKNIGCFVAKGNVVKKWLC 473


>ref|XP_002884032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329872|gb|EFH60291.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 504

 Score =  152 bits (385), Expect = 3e-35
 Identities = 69/99 (69%), Positives = 85/99 (85%)
 Frame = +2

Query: 2   WSSMEGKLDLHGMHLGCVYVIMLQWIEELRSRFSDENSVIPAEIVVVCGLGKHSSVRGES 181
           W+++EGKLDLHGMHL   Y+I+LQW++E+R RF D+  VIPAEIVVV G GKHS+VRGES
Sbjct: 405 WNAVEGKLDLHGMHLSSSYLILLQWMDEIRLRFRDQKCVIPAEIVVVSGSGKHSNVRGES 464

Query: 182 PVKSLVLEMMVRLSSPMRIDRKNIGCFVAKGKNVRNWLC 298
           PVK+LV ++MVR  SPMRIDRKN+G F+AKGKNV+ WLC
Sbjct: 465 PVKALVKKIMVRTESPMRIDRKNVGSFIAKGKNVKEWLC 503


>gb|AAU04769.1| pentatricopeptide (PPR) repeat protein-like [Cucumis melo]
          Length = 488

 Score =  152 bits (384), Expect = 4e-35
 Identities = 66/99 (66%), Positives = 83/99 (83%)
 Frame = +2

Query: 2   WSSMEGKLDLHGMHLGCVYVIMLQWIEELRSRFSDENSVIPAEIVVVCGLGKHSSVRGES 181
           W +ME KLDLHG H+G  YVIMLQWI+E+R  F DE++VIPA++ ++CG GKHS VRGES
Sbjct: 367 WDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESNVIPAQVTLICGSGKHSIVRGES 426

Query: 182 PVKSLVLEMMVRLSSPMRIDRKNIGCFVAKGKNVRNWLC 298
           PVK+L+ E+MVR  SP+RIDRKN GCF++KGK V+NWLC
Sbjct: 427 PVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465


>ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223617 [Cucumis sativus]
          Length = 1296

 Score =  151 bits (381), Expect = 8e-35
 Identities = 66/99 (66%), Positives = 82/99 (82%)
 Frame = +2

Query: 2   WSSMEGKLDLHGMHLGCVYVIMLQWIEELRSRFSDENSVIPAEIVVVCGLGKHSSVRGES 181
           W +ME KLDLHG H+G  YVIMLQWI+E+R  F DE+ VIPA++ ++CG GKHS VRGES
Sbjct: 367 WDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESYVIPAQVTLICGSGKHSIVRGES 426

Query: 182 PVKSLVLEMMVRLSSPMRIDRKNIGCFVAKGKNVRNWLC 298
           PVK+L+ E+MVR  SP+RIDRKN GCF++KGK V+NWLC
Sbjct: 427 PVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465


>ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
          Length = 1913

 Score =  151 bits (381), Expect = 8e-35
 Identities = 66/99 (66%), Positives = 82/99 (82%)
 Frame = +2

Query: 2   WSSMEGKLDLHGMHLGCVYVIMLQWIEELRSRFSDENSVIPAEIVVVCGLGKHSSVRGES 181
           W +ME KLDLHG H+G  YVIMLQWI+E+R  F DE+ VIPA++ ++CG GKHS VRGES
Sbjct: 367 WDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESYVIPAQVTLICGSGKHSIVRGES 426

Query: 182 PVKSLVLEMMVRLSSPMRIDRKNIGCFVAKGKNVRNWLC 298
           PVK+L+ E+MVR  SP+RIDRKN GCF++KGK V+NWLC
Sbjct: 427 PVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465


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