BLASTX nr result
ID: Coptis25_contig00037581
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037581 (433 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 103 1e-24 ref|XP_004172502.1| PREDICTED: uncharacterized mitochondrial pro... 96 5e-20 ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti... 98 6e-19 emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera] 98 6e-19 emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera] 98 6e-19 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 46/61 (75%), Positives = 52/61 (85%) Frame = +1 Query: 1 YGAMASTTAEIVWIRWLLEDMGVPLIAPTPMYCDNKSAIQLAHNSVFHERTKHIEIDCHI 180 Y AMASTT EIVW RWLL DMG+ TPMYCDN+S+IQ+AHNSVFHERTKHIEIDCH+ Sbjct: 1274 YCAMASTTKEIVWSRWLLADMGISFSHLTPMYCDNQSSIQIAHNSVFHERTKHIEIDCHL 1333 Query: 181 S 183 + Sbjct: 1334 T 1334 Score = 35.0 bits (79), Expect(2) = 1e-24 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 Query: 177 YLMCHHFQSGTLTLPFLSSSLQLTDF 254 +L HH + GT+ LPF+ SSLQ+ DF Sbjct: 1332 HLTRHHLKHGTIALPFVPSSLQIADF 1357 >ref|XP_004172502.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like, partial [Cucumis sativus] Length = 296 Score = 95.5 bits (236), Expect(2) = 5e-20 Identities = 39/62 (62%), Positives = 49/62 (79%) Frame = +1 Query: 1 YGAMASTTAEIVWIRWLLEDMGVPLIAPTPMYCDNKSAIQLAHNSVFHERTKHIEIDCHI 180 Y A+A T+E++W+RWLL DMG P + T ++CDN+SAIQ+AHN VFHERTKHIE DCH Sbjct: 188 YHALADATSELLWLRWLLTDMGAPQTSSTTLHCDNRSAIQIAHNDVFHERTKHIENDCHF 247 Query: 181 SC 186 C Sbjct: 248 VC 249 Score = 26.9 bits (58), Expect(2) = 5e-20 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = +3 Query: 177 YLMCHHFQSGTLTLPFLSSSLQLTDF----LRSPTPFQIIVLQKASSTL 311 + +CHH QS TL L +S+ Q D L SP ++ K STL Sbjct: 246 HFVCHHLQSNTLHLQSISTIDQPADIFNKALHSPRFTLLLHKLKVVSTL 294 >ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera] Length = 1452 Score = 98.2 bits (243), Expect = 6e-19 Identities = 40/59 (67%), Positives = 51/59 (86%) Frame = +1 Query: 1 YGAMASTTAEIVWIRWLLEDMGVPLIAPTPMYCDNKSAIQLAHNSVFHERTKHIEIDCH 177 Y A+A TT+E++W+RWLL+D+GV + TP+YCDN+SAI +AHN VFHERTKHIEIDCH Sbjct: 504 YRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIHIAHNDVFHERTKHIEIDCH 562 >emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera] Length = 1261 Score = 98.2 bits (243), Expect = 6e-19 Identities = 40/59 (67%), Positives = 52/59 (88%) Frame = +1 Query: 1 YGAMASTTAEIVWIRWLLEDMGVPLIAPTPMYCDNKSAIQLAHNSVFHERTKHIEIDCH 177 Y A+A+TT+E+ W+RWLL+D+GV + TP+YCDN+SAI +AHN+VFHERTKHIEIDCH Sbjct: 1165 YRALANTTSELFWLRWLLKDLGVSTSSATPLYCDNQSAIHIAHNNVFHERTKHIEIDCH 1223 >emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera] Length = 1287 Score = 98.2 bits (243), Expect = 6e-19 Identities = 40/59 (67%), Positives = 51/59 (86%) Frame = +1 Query: 1 YGAMASTTAEIVWIRWLLEDMGVPLIAPTPMYCDNKSAIQLAHNSVFHERTKHIEIDCH 177 Y A+A TT+E++W+RWLL+D+GV + TP+YCDN+SAI +AHN VFHERTKHIEIDCH Sbjct: 1180 YRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIHIAHNDVFHERTKHIEIDCH 1238