BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037557
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863304.1| predicted protein [Arabidopsis lyrata subsp....    90   2e-28
gb|AER12866.1| hypothetical protein (chloroplast) [Oryza sativa ...    55   8e-10
gb|ABP35454.1| ORF43m [Pinus koraiensis]                               65   8e-09
gb|AAB01584.1| ORF-98; putative [Phaseolus vulgaris] gi|7545273|...    62   6e-08
ref|YP_784094.1| putative pvs-trna-like protein [Pelargonium x h...    58   7e-07

>ref|XP_002863304.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309138|gb|EFH39563.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 97

 Score = 89.7 bits (221), Expect(2) = 2e-28
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 165 EEDQVGPCEQLDALSPFNPLSEMRQKEGKSMGRPHRLHPVGT 290
           EEDQVGPCEQLDALSPFNPLSEMRQKEGKSM RPHRLHPVGT
Sbjct: 39  EEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT 80



 Score = 60.8 bits (146), Expect(2) = 2e-28
 Identities = 33/48 (68%), Positives = 33/48 (68%)
 Frame = +1

Query: 13  MPLKDSTETKMGCQERRGGRMGSWSDLVWIVHGR*LESAALLGFPHLG 156
           MPLKDSTETKMGCQERRGGRM              LESAALLGFP LG
Sbjct: 1   MPLKDSTETKMGCQERRGGRM--------------LESAALLGFPRLG 34


>gb|AER12866.1| hypothetical protein (chloroplast) [Oryza sativa Indica Group]
           gi|353685113|gb|AER12878.1| hypothetical protein
           (chloroplast) [Oryza sativa Indica Group]
          Length = 57

 Score = 55.5 bits (132), Expect(2) = 8e-10
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -1

Query: 157 IPDEGTLGEXXXXXTVHVRSILDLTNCPSYLLYV 56
           +PDEG+LGE      VHVRSILDLTNCPSYLLY+
Sbjct: 1   MPDEGSLGEPPTPTIVHVRSILDLTNCPSYLLYL 34



 Score = 32.7 bits (73), Expect(2) = 8e-10
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -2

Query: 57 FLTAHLCLSRVFQWHVSVL 1
          F +   CLSRVFQWHVSVL
Sbjct: 35 FDSPSFCLSRVFQWHVSVL 53


>gb|ABP35454.1| ORF43m [Pinus koraiensis]
          Length = 43

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +1

Query: 151 LGSLGKRIKLALANSLMHYLPSTL*AKCGKRKENPWADPIVS 276
           +GSLGKRIKLALANSLM+YLPSTL AKCGKRK +    P+VS
Sbjct: 1   MGSLGKRIKLALANSLMYYLPSTLRAKCGKRKSHAMDRPLVS 42


>gb|AAB01584.1| ORF-98; putative [Phaseolus vulgaris] gi|7545273|gb|AAA32028.2|
           sterility protein 1 [Phaseolus vulgaris]
          Length = 98

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = -1

Query: 160 GIPDEGTLGEXXXXXTVHVRSILDLTNCPSYLLYV 56
           GIPDEGTLGE      VHVRSILDLTNCPSYLLYV
Sbjct: 56  GIPDEGTLGEPPTPTIVHVRSILDLTNCPSYLLYV 90


>ref|YP_784094.1| putative pvs-trna-like protein [Pelargonium x hortorum]
           gi|115532006|ref|YP_784162.1| putative pvs-trna-like
           protein [Pelargonium x hortorum]
           gi|112382092|gb|ABI17285.1| putative pvs-trna-like
           protein [Pelargonium x hortorum]
           gi|112382160|gb|ABI17353.1| putative pvs-trna-like
           protein [Pelargonium x hortorum]
          Length = 42

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -1

Query: 157 IPDEGTLGEXXXXXTVHVRSILDLTNCPSYLLYV 56
           +PDEGTLGE     TVHVRSILDLTNCPSYLLYV
Sbjct: 1   MPDEGTLGEPPTPTTVHVRSILDLTNCPSYLLYV 34