BLASTX nr result

ID: Coptis25_contig00037554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037554
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   129   2e-28
ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homo...   124   8e-27
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   124   8e-27
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_003598665.1| Integrator complex subunit [Medicago truncat...   114   8e-24

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/94 (63%), Positives = 67/94 (71%)
 Frame = +1

Query: 1   DALFCHVELIKAKKLHVFPAIHSINFLMRWQEPCIVFAPHWSLRLGPVVHLLRRWCGDPN 180
           +  F H +LIK KKLHVFPA+HS N L  WQEPCI F+PHWSLRLGPVVHLLRRW GD N
Sbjct: 490 EPFFAHTQLIKEKKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVVHLLRRWSGDEN 549

Query: 181 SLLVLEQEVDADXXXXXXXXXXXXXXQCSFLSGI 282
           SLL++E+ VDAD              QCSFLSGI
Sbjct: 550 SLLIMEEGVDADLALLPFKPMAMKVLQCSFLSGI 583


>ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
           sativus]
          Length = 680

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/94 (61%), Positives = 66/94 (70%)
 Frame = +1

Query: 1   DALFCHVELIKAKKLHVFPAIHSINFLMRWQEPCIVFAPHWSLRLGPVVHLLRRWCGDPN 180
           + +F  VEL+K  KLHV PAIHS   L+ WQEPCIVF PHWSLRLGPVVHLLRRWCGDP+
Sbjct: 399 EPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGDPS 458

Query: 181 SLLVLEQEVDADXXXXXXXXXXXXXXQCSFLSGI 282
           SLLVLE+ +D +              QCSF SGI
Sbjct: 459 SLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGI 492


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/94 (61%), Positives = 66/94 (70%)
 Frame = +1

Query: 1   DALFCHVELIKAKKLHVFPAIHSINFLMRWQEPCIVFAPHWSLRLGPVVHLLRRWCGDPN 180
           + +F  VEL+K  KLHV PAIHS   L+ WQEPCIVF PHWSLRLGPVVHLLRRWCGDP+
Sbjct: 412 EPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLRRWCGDPS 471

Query: 181 SLLVLEQEVDADXXXXXXXXXXXXXXQCSFLSGI 282
           SLLVLE+ +D +              QCSF SGI
Sbjct: 472 SLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGI 505


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/94 (63%), Positives = 66/94 (70%)
 Frame = +1

Query: 1   DALFCHVELIKAKKLHVFPAIHSINFLMRWQEPCIVFAPHWSLRLGPVVHLLRRWCGDPN 180
           + LF HVEL+K KKLHVFPA+HS N +  WQEPCIVFA HW+LRLGPVV LLRRW  D N
Sbjct: 420 EPLFSHVELMKDKKLHVFPAVHSPNLITNWQEPCIVFASHWNLRLGPVVPLLRRWRRDEN 479

Query: 181 SLLVLEQEVDADXXXXXXXXXXXXXXQCSFLSGI 282
           SLLVLE  +DAD              QCSFLSGI
Sbjct: 480 SLLVLEDGLDADMALLPFKPIAMKVLQCSFLSGI 513


>ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
           gi|355487713|gb|AES68916.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 536

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/94 (56%), Positives = 62/94 (65%)
 Frame = +1

Query: 1   DALFCHVELIKAKKLHVFPAIHSINFLMRWQEPCIVFAPHWSLRLGPVVHLLRRWCGDPN 180
           + LF HV+L+K KK+ V P IHS   L  WQEPCIVF PHWSLR+GP+VHLLRRWCGDP 
Sbjct: 219 EPLFDHVKLLKEKKIRVVPNIHSHQLLKDWQEPCIVFCPHWSLRMGPIVHLLRRWCGDPK 278

Query: 181 SLLVLEQEVDADXXXXXXXXXXXXXXQCSFLSGI 282
           SLL+LE  V+ +              QC F SGI
Sbjct: 279 SLLILEDMVNPELALLPFKPVEMKVLQCLFPSGI 312


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