BLASTX nr result

ID: Coptis25_contig00037512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037512
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...   109   3e-22
ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus ...   100   1e-19
ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chlorop...    98   6e-19
emb|CBI16521.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chlorop...    94   1e-17

>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   LIENLMDPAHVPYAHYGILT-PSRKPSVKADREGGMPLEINITKLDKDGFLAKQDNGFNK 179
           LIENLMDPAHVPYAHYGI+T PS+K  VKADREGG PLE+ I KLD+ GF+ KQ+ G +K
Sbjct: 236 LIENLMDPAHVPYAHYGIMTVPSQKKRVKADREGGRPLEMKIQKLDRSGFIGKQEGGTSK 295

Query: 180 FVAPCLFYYFSSLSSDGEPSKSGSIK 257
           F+ PC+FY  S L  D     + S++
Sbjct: 296 FIPPCVFYVSSDLFIDKTNGSASSVE 321


>ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus communis]
           gi|223526766|gb|EEF28992.1| pheophorbide A oxygenase,
           putative [Ricinus communis]
          Length = 552

 Score =  100 bits (250), Expect = 1e-19
 Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   LIENLMDPAHVPYAHYGILTPSRKPSVKADREGGMPLEINITKLDKDGFLAKQDNGFNKF 182
           LIENLMDPAHVPYAHYG++   R+P  K DREGG P+++++ KLDK+GF+ KQ+ G +KF
Sbjct: 256 LIENLMDPAHVPYAHYGLMK-IRQPKEKVDREGGKPIDMSVKKLDKNGFIGKQEKGSSKF 314

Query: 183 VAPCLFY-YFSSLSSDGEPSKSGSIKK 260
           +APC+FY Y   L   G  + S S  K
Sbjct: 315 IAPCIFYAYTDPLVDQGNGAVSSSETK 341


>ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 529

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   LIENLMDPAHVPYAHYGIL-TPSRKPSVKADREGGMPLEINITKLDKDGFLAKQDNGFNK 179
           LIENLMDPAHVPYAHYG++ TP  +P VKADREGG PL+++I KLD +GF A Q  G +K
Sbjct: 240 LIENLMDPAHVPYAHYGLMRTP--QPKVKADREGGRPLDMSIEKLDINGFSANQAWGKSK 297

Query: 180 FVAPCLFYYFS--SLSSDGEPSKSGSIKK 260
           F+ PC+FY ++    +S GE  KS + KK
Sbjct: 298 FMPPCIFYAYTPDQPASSGETKKSSAKKK 326


>emb|CBI16521.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/85 (55%), Positives = 58/85 (68%)
 Frame = +3

Query: 3   LIENLMDPAHVPYAHYGILTPSRKPSVKADREGGMPLEINITKLDKDGFLAKQDNGFNKF 182
           LIENLMDPAHVPYAHYGI+T        ADREGG PLE+ I KLD+ GF+ KQ+ G +KF
Sbjct: 114 LIENLMDPAHVPYAHYGIMT--------ADREGGRPLEMKIQKLDRSGFIGKQEGGTSKF 165

Query: 183 VAPCLFYYFSSLSSDGEPSKSGSIK 257
           + PC+FY  S L  D     + S++
Sbjct: 166 IPPCVFYVSSDLFIDKTNGSASSVE 190


>ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 531

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
 Frame = +3

Query: 3   LIENLMDPAHVPYAHYGIL-TPSRKPSVKADREGGMPLEINITKLDKDGFLAKQDNGFNK 179
           LIENLMDPAHVPYAHYG++ TP  KP VK DREGG PLE++I  LD +GF A Q    +K
Sbjct: 241 LIENLMDPAHVPYAHYGLMRTP--KPKVKVDREGGRPLELSIETLDINGFTANQGWSKSK 298

Query: 180 FVAPCLFYYFSSL---SSDGEPSKSGSIKK 260
           F+ PC+FY ++     +S  E  KS + KK
Sbjct: 299 FMPPCIFYVYTDSDQPASSAETQKSSAQKK 328


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