BLASTX nr result
ID: Coptis25_contig00037508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037508 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535700.1| PREDICTED: E3 ubiquitin-protein ligase PUB22... 103 1e-20 emb|CAN82979.1| hypothetical protein VITISV_023329 [Vitis vinifera] 102 2e-20 ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_003520716.1| PREDICTED: E3 ubiquitin-protein ligase PUB22... 101 5e-20 ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|2... 101 7e-20 >ref|XP_003535700.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max] Length = 421 Score = 103 bits (257), Expect = 1e-20 Identities = 66/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%) Frame = +1 Query: 1 RIPTPKPLVDKVQIMKLISNAMIPHLQMRSLRRLKSIAAESERNKRCIESTSGAIEFLAS 180 RIPTPKP V+K QI KL+ +A H + LRRLKSIA+ SE NKRC+E+ SGA+EFLAS Sbjct: 87 RIPTPKPPVNKNQISKLLKDAS--HSPLTCLRRLKSIASGSETNKRCMEA-SGAVEFLAS 143 Query: 181 LVKQNCS----TKEMDSN-GDGVEI-TMARDEALGLLHNLQISEAGLKTL 312 +V N S + E DSN G G E+ T A DEAL LLHNL +SE GLKTL Sbjct: 144 IVINNNSNIDSSNEADSNDGSGFELKTSASDEALSLLHNLHLSEQGLKTL 193 >emb|CAN82979.1| hypothetical protein VITISV_023329 [Vitis vinifera] Length = 364 Score = 102 bits (255), Expect = 2e-20 Identities = 58/105 (55%), Positives = 81/105 (77%), Gaps = 1/105 (0%) Frame = +1 Query: 1 RIPTPKPLVDKVQIMKLISNAMIPHLQMRSLRRLKSIAAESERNKRCIESTSGAIEFLAS 180 RIPTPK ++KVQI+KL+++A P LQM+ + +L+++AAES+ NKRCIES +GA+EFLAS Sbjct: 85 RIPTPKIPINKVQIVKLLNDAKSPQLQMKCIGKLRALAAESDANKRCIES-AGAVEFLAS 143 Query: 181 LV-KQNCSTKEMDSNGDGVEITMARDEALGLLHNLQISEAGLKTL 312 +V K N +T E +S+ G+E A EAL +LH LQ+SEAGL+ L Sbjct: 144 IVSKANFTTFEEESD-KGLESRSASSEALSILHYLQVSEAGLEKL 187 >ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|222845522|gb|EEE83069.1| predicted protein [Populus trichocarpa] Length = 415 Score = 102 bits (253), Expect = 4e-20 Identities = 55/106 (51%), Positives = 79/106 (74%), Gaps = 2/106 (1%) Frame = +1 Query: 1 RIPTPKPLVDKVQIMKLISNAM-IPHLQMRSLRRLKSIAAESERNKRCIESTSGAIEFLA 177 RIPTPKPL D+ QI KL+++A PHL ++SLRRL+SI ESERN+ C+E +G ++FLA Sbjct: 84 RIPTPKPLADRAQISKLLNDAKKFPHLLLKSLRRLRSITLESERNRSCLEE-AGVVDFLA 142 Query: 178 SLVKQNCSTK-EMDSNGDGVEITMARDEALGLLHNLQISEAGLKTL 312 S++K + ST ++DS+ + E T A DEAL +L++L+IS+ LK L Sbjct: 143 SILKTDNSTSVQIDSDDNESEFTRASDEALNILYHLKISQRQLKNL 188 >ref|XP_003520716.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max] Length = 420 Score = 101 bits (252), Expect = 5e-20 Identities = 63/109 (57%), Positives = 77/109 (70%), Gaps = 5/109 (4%) Frame = +1 Query: 1 RIPTPKPLVDKVQIMKLISNAMIPHLQMRSLRRLKSIAAESERNKRCIESTSGAIEFLAS 180 RIPTPKP ++K QI KL+ +A H + LRRLKSIA+ SE NKRC+E+ SG +EFLAS Sbjct: 87 RIPTPKPPINKNQISKLLKDAS--HSPLTCLRRLKSIASGSETNKRCMEA-SGVVEFLAS 143 Query: 181 LVKQN---CSTKEMDSN-GDGVEI-TMARDEALGLLHNLQISEAGLKTL 312 +V N S+ E DSN G G E+ T A DEAL LLHNL +S+ GLKTL Sbjct: 144 IVINNNNIVSSNEADSNEGSGFELRTSASDEALSLLHNLHLSDQGLKTL 192 >ref|XP_002308325.1| predicted protein [Populus trichocarpa] gi|222854301|gb|EEE91848.1| predicted protein [Populus trichocarpa] Length = 413 Score = 101 bits (251), Expect = 7e-20 Identities = 52/104 (50%), Positives = 75/104 (72%) Frame = +1 Query: 1 RIPTPKPLVDKVQIMKLISNAMIPHLQMRSLRRLKSIAAESERNKRCIESTSGAIEFLAS 180 RIPTPKP ++K Q+ KL+++A P Q++ LR+L+SIA E+E NKRC+E+ +GA+EFL S Sbjct: 84 RIPTPKPPINKTQVAKLLNDAKSPQQQVKCLRKLRSIANENETNKRCMEA-AGAVEFLVS 142 Query: 181 LVKQNCSTKEMDSNGDGVEITMARDEALGLLHNLQISEAGLKTL 312 +V S +++ DG EI DEAL +L+ L+ISE+GLK L Sbjct: 143 VVNNFNSLSFEETSDDGFEIARPGDEALSILYGLEISESGLKNL 186