BLASTX nr result

ID: Coptis25_contig00037507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037507
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534747.1| conserved hypothetical protein [Ricinus comm...   124   8e-27

>ref|XP_002534747.1| conserved hypothetical protein [Ricinus communis]
           gi|255604001|ref|XP_002538152.1| conserved hypothetical
           protein [Ricinus communis] gi|223513575|gb|EEF24232.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223524644|gb|EEF27638.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/86 (79%), Positives = 70/86 (81%), Gaps = 6/86 (6%)
 Frame = -1

Query: 264 HSHSMEEQLLNPHYNQSKISPDRYMM-LNQDLDRERGLPLFGWLFETKALIGMVLIPMFL 88
           HSHSMEEQLLNPHYNQS+ SPDRYMM LN+D DRERGLPL  WLFE KALIGMVLIPMF 
Sbjct: 17  HSHSMEEQLLNPHYNQSQFSPDRYMMMLNRDQDRERGLPLC-WLFEAKALIGMVLIPMFF 75

Query: 87  LVSFGFESLPLPD-----AEVILDFF 25
           LVSFGFESLPL         VILDFF
Sbjct: 76  LVSFGFESLPLHVLTRLLKAVILDFF 101


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