BLASTX nr result

ID: Coptis25_contig00037493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037493
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40382.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]     69   3e-10
gb|ABK92867.1| unknown [Populus trichocarpa]                           62   4e-08
ref|XP_002511864.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002320800.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>emb|CBI40382.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 43/49 (87%), Gaps = 2/49 (4%)
 Frame = +3

Query: 132 LDDVLINEQR--SQERENSTKRISCLAPVAYTREESQMPVSRSSNNIVR 272
           LD+++ N+QR  SQERENS KRISCLAPV++TREESQ+P+SRSS ++ R
Sbjct: 63  LDEIVANDQRFGSQERENSMKRISCLAPVSFTREESQIPISRSSTSLAR 111


>ref|XP_002274925.1| PREDICTED: protein PAIR1-like [Vitis vinifera]
          Length = 378

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 43/49 (87%), Gaps = 2/49 (4%)
 Frame = +3

Query: 132 LDDVLINEQR--SQERENSTKRISCLAPVAYTREESQMPVSRSSNNIVR 272
           LD+++ N+QR  SQERENS KRISCLAPV++TREESQ+P+SRSS ++ R
Sbjct: 63  LDEIVANDQRFGSQERENSMKRISCLAPVSFTREESQIPISRSSTSLAR 111


>gb|ABK92867.1| unknown [Populus trichocarpa]
          Length = 405

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/49 (61%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
 Frame = +3

Query: 132 LDDVLINEQR--SQERENSTKRISCLAPVAYTREESQMPVSRSSNNIVR 272
           LD+ L N+QR  SQERENS K+ SCL  V+Y RE+SQ+P+SRSS+N++R
Sbjct: 65  LDEALTNDQRFSSQERENSVKKPSCLPVVSYRREDSQLPISRSSSNLIR 113


>ref|XP_002511864.1| conserved hypothetical protein [Ricinus communis]
           gi|223549044|gb|EEF50533.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 999

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/48 (60%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = +3

Query: 135 DDVLINEQR--SQERENSTKRISCLAPVAYTREESQMPVSRSSNNIVR 272
           D+ L  +QR  SQERENS K+ SC   ++Y REESQMP+SRSS NI+R
Sbjct: 64  DEALTTDQRFNSQERENSLKKTSCFPSISYAREESQMPISRSSTNIMR 111


>ref|XP_002320800.1| predicted protein [Populus trichocarpa] gi|222861573|gb|EEE99115.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = +3

Query: 132 LDDVLINEQR--SQERENSTKRISCLAPVAYTREESQMPVSRSSNNIVR 272
           LD+ L  +QR  SQE+ENS K+ SCL  ++Y REESQ+PVSRSS N+VR
Sbjct: 65  LDEALTIDQRFSSQEQENSVKKPSCLPVISYKREESQLPVSRSSCNLVR 113


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