BLASTX nr result
ID: Coptis25_contig00037481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00037481
(1298 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy... 628 e-178
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct... 627 e-177
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase... 622 e-176
ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidy... 621 e-175
emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase p... 620 e-175
>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
[Ricinus communis] gi|223547949|gb|EEF49441.1|
bifunctional dihydrofolate reductase-thymidylate
synthase, putative [Ricinus communis]
Length = 528
Score = 628 bits (1620), Expect = e-178
Identities = 302/406 (74%), Positives = 358/406 (88%)
Frame = +1
Query: 79 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 258
++ +G +N+ + D PR RTYQV+VAAT MGIGKDGKLPWRLPSDL FFK+VT+TT
Sbjct: 8 NLSNGNANIEQHD----PR--RTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTLTT 61
Query: 259 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 438
++ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG ASALE+
Sbjct: 62 TDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASALEL 121
Query: 439 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 618
LA PYCLSIEKV+VIGGGQI EALNAP C+A+HITEIET+ +CDTF+P+IDS F W
Sbjct: 122 LAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFHPW 181
Query: 619 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 798
Y SFP+V++NIR+SFATY+R+RSSA ES ++GL+ ++SSE+SKF+++ FSFLPK++F+
Sbjct: 182 YLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMVFD 241
Query: 799 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEE+ YL+LVQ+II +G K DRT TGTLSKFGCQ+RFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVE 301
Query: 979 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 1158
ELLWFISGSTN+KVLQEKGIHIWDGN+SR+YLDSIGL +REEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARY 361
Query: 1159 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMAL 1296
T+MHA+Y GQGFDQLLDVVNKI+N PDDRRI+LSAWNPSDLKLMAL
Sbjct: 362 TDMHADYTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMAL 407
>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Vitis vinifera]
Length = 524
Score = 627 bits (1618), Expect = e-177
Identities = 302/395 (76%), Positives = 347/395 (87%)
Frame = +1
Query: 112 GDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTSELGKTNAVIM 291
G++++ P RTYQV+VAAT MGIGKDGKLPWRLPSD+ FK++TMT ++ K NAVIM
Sbjct: 12 GNANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIFKDITMTVADTVKKNAVIM 71
Query: 292 GRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEILAGPPYCLSIE 471
GRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG +ASALE+LA PYCLSIE
Sbjct: 72 GRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMASALELLAASPYCLSIE 131
Query: 472 KVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWYSSFPLVQDNI 651
KVFVIGGGQI EALNAP C+AIHITEIET+ ECDTF+P+IDS F+ WYSSFPLV++NI
Sbjct: 132 KVFVIGGGQILREALNAPGCDAIHITEIETSFECDTFIPAIDSLVFQPWYSSFPLVENNI 191
Query: 652 RHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFERHEEYTYLKLV 831
R+SF TY+R+RSSA ES NG D+ ES KFE++ FSFLPK+IFERHEEY YL+LV
Sbjct: 192 RYSFMTYVRVRSSADESQIQNNG---DSGLESIKFEVKKFSFLPKMIFERHEEYIYLRLV 248
Query: 832 QDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEELLWFISGSTN 1011
+DII NG Q+ DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVEELLWFISGSTN
Sbjct: 249 EDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFISGSTN 308
Query: 1012 SKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASYTNMHANYNGQG 1191
+KVLQEKGIHIWDGN+SR+YLDSIGL DREEGDLGP+YGFQWRHFGASY +MHA+Y GQG
Sbjct: 309 AKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHADYTGQG 368
Query: 1192 FDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMAL 1296
FDQLLDV+NKI+N P+DRRI+LSAWNPSDLKLMAL
Sbjct: 369 FDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMAL 403
>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
gi|222849082|gb|EEE86629.1| dihydrofolate
reductase-thymidylate synthase [Populus trichocarpa]
Length = 528
Score = 622 bits (1604), Expect = e-176
Identities = 298/406 (73%), Positives = 351/406 (86%)
Frame = +1
Query: 79 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 258
++ +G +N + D PR +TYQV+VAAT MGIGKDGKLPW+LPSDL FFK++T+TT
Sbjct: 8 NLSNGNANTQQSD----PR--KTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLTT 61
Query: 259 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 438
+ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG + SALE+
Sbjct: 62 MDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALEL 121
Query: 439 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 618
LA PYCLSIEKVFVIGGGQI E+LNAP C+AIHITEIET+ +CDTF+P+ID+ F+ W
Sbjct: 122 LAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQPW 181
Query: 619 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 798
YSSFP V+++IRH F TY+R+RSS ES S NG D +SE+SKFE++ FSFLPK++FE
Sbjct: 182 YSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVFE 241
Query: 799 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEEY YL++VQDII +G K DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVE 301
Query: 979 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 1158
ELLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL DREEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARY 361
Query: 1159 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMAL 1296
T+MHA+Y GQGFDQLLDV++KI+N P+DRRI++SAWNPSDLKLMAL
Sbjct: 362 TDMHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMAL 407
>ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1706522|sp|P51820.1|DRTS_SOYBN RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase; Short=DHFR-TS; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|999190|gb|AAB34317.1|
dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1096144|prf||2111237A dihydrofolate
reductase-thymidylate synthase
Length = 530
Score = 621 bits (1601), Expect = e-175
Identities = 302/406 (74%), Positives = 343/406 (84%)
Frame = +1
Query: 79 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 258
SV+S G + G + P RTYQV+VAAT GIGKDGKLPWRLP+DL FFKE+TM T
Sbjct: 6 SVISNGHS--NGSVNPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKT 63
Query: 259 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 438
SE GK NA++MGRKTWESIP +YRPL GRLNVVLTR GS +IA+AENVV+CG ++SALE+
Sbjct: 64 SEPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALEL 123
Query: 439 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 618
LA PY LSIEKVFVIGGGQIF EALN P CEAIH+TEI+++IECDTFMP +D FR W
Sbjct: 124 LAASPYSLSIEKVFVIGGGQIFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPW 183
Query: 619 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 798
YSSFP V++NIR+SF TY+R+RSSAAES DN+SES KFE+++FSFLPK+I E
Sbjct: 184 YSSFPKVENNIRYSFTTYVRVRSSAAESAGQNIDPLLDNNSESMKFEVKDFSFLPKMISE 243
Query: 799 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 978
RHEEY YLKLVQDII GT K DRT TGTLSKFGCQMRFNLR FPLLTTK+VFWRGVVE
Sbjct: 244 RHEEYLYLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVE 303
Query: 979 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 1158
ELLWFISGSTN+KVLQEKGIHIWDGN+SREYLD +GL +REEGDLGPVYGFQWRHFGA Y
Sbjct: 304 ELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARY 363
Query: 1159 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMAL 1296
T+MH +Y+GQGFDQLLDV+NKI+ PDDRRI+LSAWNP DLKLMAL
Sbjct: 364 TDMHHDYSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMAL 409
>emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus
carota]
Length = 577
Score = 620 bits (1600), Expect = e-175
Identities = 295/427 (69%), Positives = 355/427 (83%)
Frame = +1
Query: 16 ITSSNIFYLQRFAANKCSQRFSVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKD 195
++SSN + RF S+R + + GS + + D RTYQV+VAAT +MGIGKD
Sbjct: 35 LSSSNFSHCHRFTTYMASERLANPTNGSGITRPDPQ------RTYQVVVAATQNMGIGKD 88
Query: 196 GKLPWRLPSDLNFFKEVTMTTSELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGS 375
GKLPWRLPSD+ FFK+VTMTTS+ K NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS
Sbjct: 89 GKLPWRLPSDMKFFKDVTMTTSDPLKRNAVIMGRKTWESIPIQHRPLPGRLNVVLTRSGS 148
Query: 376 SNIASAENVVVCGGLASALEILAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEI 555
+IA+ ENVV+CG + SALE+LAG PYC+S+EKVFVIGGGQI+ EALNAP C+A+HITEI
Sbjct: 149 FDIATVENVVICGSMISALELLAGSPYCVSVEKVFVIGGGQIYREALNAPGCDAVHITEI 208
Query: 556 ETNIECDTFMPSIDSKHFRLWYSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDN 735
E +IECDTF+P +D F+ WYSSFPLV++ IR+ F TY+R+R+S AE S NG + D+
Sbjct: 209 EEHIECDTFIPLLDESVFQPWYSSFPLVENKIRYCFTTYVRVRNSVAELTSQTNGCSSDS 268
Query: 736 SSESSKFEIENFSFLPKLIFERHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRF 915
S+S FEI+NFSFLPK +FE+HEEY YL LV++II NG K DRT TGT+S FGCQMRF
Sbjct: 269 KSDSGNFEIQNFSFLPKTVFEKHEEYLYLGLVENIISNGVTKNDRTRTGTVSIFGCQMRF 328
Query: 916 NLRKYFPLLTTKRVFWRGVVEELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVD 1095
NLRK FPLLTTK+VFWRGVVEELLWFISGSTN+K+L+EKG++IW+GN SREYLDSIGL D
Sbjct: 329 NLRKSFPLLTTKKVFWRGVVEELLWFISGSTNAKILKEKGVNIWEGNGSREYLDSIGLTD 388
Query: 1096 REEGDLGPVYGFQWRHFGASYTNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPS 1275
REEGDLGP+YGFQWRHFGA YT+MHA+Y+GQGFDQLLDV++KI+N PDDRRI+ SAWNPS
Sbjct: 389 REEGDLGPIYGFQWRHFGARYTDMHADYSGQGFDQLLDVISKIKNNPDDRRIIQSAWNPS 448
Query: 1276 DLKLMAL 1296
DL+LMAL
Sbjct: 449 DLRLMAL 455