BLASTX nr result

ID: Coptis25_contig00037480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037480
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96363.1| unknown [Populus trichocarpa x Populus deltoides]       55   1e-06
tpg|DAA50792.1| TPA: hypothetical protein ZEAMMB73_207712 [Zea m...    57   3e-06
ref|XP_003559548.1| PREDICTED: uncharacterized protein LOC100843...    57   3e-06
ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800...    57   3e-06
ref|XP_002512246.1| conserved hypothetical protein [Ricinus comm...    53   3e-06

>gb|ABK96363.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 407

 Score = 55.1 bits (131), Expect(2) = 1e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = -1

Query: 204 AETSTCKGLRKLLEETTAALLQHTDSSVSAFSFAEVKTTTWDAKELFKQILAEESAKFDE 25
           A+TS+ +GL  +L ET+ ALL+H D  +S  SF +VK +  D ++ F Q+  EE  KFDE
Sbjct: 252 ADTSSSEGLNYVLTETSLALLRHPDYCISGHSFVDVKRSMEDGEKRFNQLSIEERGKFDE 311



 Score = 22.3 bits (46), Expect(2) = 1e-06
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 254 TSVIKLQVCWLGTERVVQK 198
           TSV+KLQV  LG  R +Q+
Sbjct: 225 TSVLKLQVGLLGMGRSLQR 243


>tpg|DAA50792.1| TPA: hypothetical protein ZEAMMB73_207712 [Zea mays]
          Length = 377

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 204 AETSTCKGLRKLLEETTAALLQHTDSSVSAFSFAEVKTTTWDAKELFKQILAEESAKFDE 25
           A+TST  GL  +L ETT ALL+H D  +SA+S  +VK +  D ++ F Q+  EE  KFDE
Sbjct: 222 ADTSTPAGLSYVLTETTLALLRHPDCCISAYSSVDVKRSVDDGEKRFNQLSIEERGKFDE 281


>ref|XP_003559548.1| PREDICTED: uncharacterized protein LOC100843817 [Brachypodium
           distachyon]
          Length = 364

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = -1

Query: 204 AETSTCKGLRKLLEETTAALLQHTDSSVSAFSFAEVKTTTWDAKELFKQILAEESAKFDE 25
           A+TST  GL  +L ETT ALL+H D  +SA+S  +VK +  D ++ F Q+  EE  KFDE
Sbjct: 209 ADTSTPSGLSYVLTETTLALLRHPDCCISAYSTVDVKRSIDDGEKRFNQLSIEERGKFDE 268


>ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800250 [Glycine max]
          Length = 378

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -1

Query: 204 AETSTCKGLRKLLEETTAALLQHTDSSVSAFSFAEVKTTTWDAKELFKQILAEESAKFDE 25
           A+TST +GL  +L ETT ALL+H D  +SA+S  ++K    D ++ F Q+  EE  KFDE
Sbjct: 223 ADTSTSEGLHYVLTETTLALLRHPDYCISAYSSVDIKRGIEDGEKRFNQLSIEERGKFDE 282


>ref|XP_002512246.1| conserved hypothetical protein [Ricinus communis]
           gi|223548207|gb|EEF49698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score = 53.1 bits (126), Expect(2) = 3e-06
 Identities = 25/60 (41%), Positives = 40/60 (66%)
 Frame = -1

Query: 204 AETSTCKGLRKLLEETTAALLQHTDSSVSAFSFAEVKTTTWDAKELFKQILAEESAKFDE 25
           A+TS+ +GL  +L ET+ ALL+H D  +S +S+ +VK +  + ++ F Q+  EE  KFDE
Sbjct: 205 ADTSSSEGLTYVLTETSLALLRHPDYCISGYSYVDVKRSMDEGEKRFNQLSIEERGKFDE 264



 Score = 23.1 bits (48), Expect(2) = 3e-06
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 254 TSVIKLQVCWLGTERVVQK 198
           TSV+KLQV  LG  R +Q+
Sbjct: 178 TSVLKLQVGLLGMGRALQR 196


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