BLASTX nr result

ID: Coptis25_contig00037476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037476
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317602.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002532828.1| ATP binding protein, putative [Ricinus commu...   182   4e-44
ref|XP_002266404.2| PREDICTED: uncharacterized protein LOC100249...   153   1e-35
ref|XP_003636126.1| Kinesin-4 [Medicago truncatula] gi|355502061...   149   3e-34
ref|XP_003635892.1| Kinesin-4, partial [Medicago truncatula] gi|...   149   3e-34

>ref|XP_002317602.1| predicted protein [Populus trichocarpa] gi|222860667|gb|EEE98214.1|
           predicted protein [Populus trichocarpa]
          Length = 1129

 Score =  186 bits (471), Expect = 2e-45
 Identities = 103/216 (47%), Positives = 132/216 (61%), Gaps = 42/216 (19%)
 Frame = +1

Query: 13  GVEFIEDSFFTGGDVIRTETSIGDTEEDGV-LYQTARCGNCLYKFEELVAGNYIVDLHFA 189
           GVEF+ D  F GGD +RT+ +IGD ++ G+ LYQTAR GN  Y F  L  GNY V LH A
Sbjct: 145 GVEFLGDDCFLGGDTVRTDATIGDGQDGGLSLYQTARYGNFSYCFRALEPGNYDVSLHLA 204

Query: 190 EIIFINGPSGMRVFNVFIQEEKVVSAIDIYDLVGSNKPLMLSGLKAFVNGNGGLSIRFEG 369
           EI+F +GPSG+RVF+VF+QE+KV+S +DIY  VG+NKPL++SGLKAFV G+ GL IRFEG
Sbjct: 205 EIVFTDGPSGLRVFDVFVQEKKVMSCLDIYAQVGANKPLVVSGLKAFVEGDEGLLIRFEG 264

Query: 370 VTGKSVISGISVKKDHQA-----------------------------------------E 426
           V GK ++ GISV KD  A                                         E
Sbjct: 265 VMGKPIVCGISVTKDFSANIGEARLLKPIGMSQVAECDSPKDNGHLEVEGDYQKLLRDHE 324

Query: 427 YQFKELTETKRNLQWFKKEYELKSKECQETWKSLRE 534
           +Q +ELTE +R +   K+E  LKS+ECQ+  KSL+E
Sbjct: 325 FQRRELTEMRRAMDELKRENRLKSRECQDALKSLQE 360


>ref|XP_002532828.1| ATP binding protein, putative [Ricinus communis]
           gi|223527419|gb|EEF29558.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1147

 Score =  182 bits (461), Expect = 4e-44
 Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 35/209 (16%)
 Frame = +1

Query: 13  GVEFIEDSFFTGGDVIRTETSIGDT--EEDGV-LYQTARCGNCLYKFEELVAGNYIVDLH 183
           GV+F+ED+ +TGGD ++T  +IGD   EEDG+ LYQTAR GN  Y    +  GNY+V LH
Sbjct: 163 GVQFLEDTCYTGGDTVKTNATIGDLDREEDGLSLYQTARFGNFSYCIPAMEPGNYVVTLH 222

Query: 184 FAEIIFINGPSGMRVFNVFIQEEKVVSAIDIYDLVGSNKPLMLSGLKAFVNGNGGLSIRF 363
            AEI+F +GP G RVF+VFIQE+KVVS++DIY  VG+NKPL++S LK  V+G  GL+IRF
Sbjct: 223 LAEIVFTDGPPGRRVFDVFIQEKKVVSSLDIYAQVGANKPLVISQLKTCVDGEEGLTIRF 282

Query: 364 EGVTGKSVISGISVKKDHQA--------------------------------EYQFKELT 447
           +GV G  ++ GIS+ +D  A                                E+Q KELT
Sbjct: 283 QGVIGSPIVCGISITEDSSARKDEYVVFLFVSAPISCEQEPDGDHQKLERHVEFQEKELT 342

Query: 448 ETKRNLQWFKKEYELKSKECQETWKSLRE 534
           E +R L+  K+E +LK++ECQ+ W SL E
Sbjct: 343 EMRRALEELKRENQLKNRECQDAWNSLHE 371


>ref|XP_002266404.2| PREDICTED: uncharacterized protein LOC100249019 [Vitis vinifera]
          Length = 1071

 Score =  153 bits (387), Expect = 1e-35
 Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 27/200 (13%)
 Frame = +1

Query: 10  TGVEFIEDSFFTGGDVIRTETSIGDTEEDGVLYQTARCGNCLYKFEELVAGNYIVDLHFA 189
           + ++F+ D+FF GGDV+RTE  I +  +  ++YQ+AR GN  Y+FE L  G+Y VDLHF 
Sbjct: 92  SNMKFLADTFFQGGDVLRTEECITEGGDCPLIYQSARLGNFSYRFENLHPGDYFVDLHFV 151

Query: 190 EIIFINGPSGMRVFNVFIQEEKVVSAIDIYDLVGSNKPLMLSGLKAFVNGNGGLSIRFEG 369
           EII  +GP GMRVFNVF+QEEKV+S  DI+ +VG+NKP+ L  L+  V  +G + IRFEG
Sbjct: 152 EIINTDGPKGMRVFNVFVQEEKVLSDFDIFSIVGANKPVQLVDLRVPVKEDGLIVIRFEG 211

Query: 370 VTGKSVISGISVKK----------------DH-QAEYQF----KELTETKRNLQWFKKEY 486
           V G  ++SGI ++K                +H  AE +     K+L +TK  +++ KK  
Sbjct: 212 VNGSPMVSGICIRKAPMLSVPPASPEYLICNHCSAEIEVSPIQKKLKQTKFTVKYEKKIE 271

Query: 487 EL------KSKECQETWKSL 528
           EL      K+ EC E W SL
Sbjct: 272 ELTMQCQRKTDECYEAWMSL 291


>ref|XP_003636126.1| Kinesin-4 [Medicago truncatula] gi|355502061|gb|AES83264.1|
           Kinesin-4 [Medicago truncatula]
          Length = 1004

 Score =  149 bits (375), Expect = 3e-34
 Identities = 81/201 (40%), Positives = 113/201 (56%), Gaps = 27/201 (13%)
 Frame = +1

Query: 13  GVEFIEDSFFTGGDVIRTETSIGDTEEDGVLYQTARCGNCLYKFEELVAGNYIVDLHFAE 192
           GV+F+ D+FF GGDV  T  +I +  +   +YQ+AR G+  Y+ + L  G Y+VDLHF E
Sbjct: 51  GVKFLSDTFFDGGDVFLTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYLVDLHFVE 110

Query: 193 IIFINGPSGMRVFNVFIQEEKVVSAIDIYDLVGSNKPLMLSGLKAFVNGNGGLSIRFEGV 372
           II +NGP GMRVFNV+IQEEKV+S +DIY  VG NKPL L   +A V  +G + IRFE +
Sbjct: 111 IINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESL 170

Query: 373 TGKSVISGISVKKDHQAE---------------------------YQFKELTETKRNLQW 471
            G+ V+SGI +++  +                              Q K   + +  ++ 
Sbjct: 171 NGRPVVSGICIRRASKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKE 230

Query: 472 FKKEYELKSKECQETWKSLRE 534
              + ELK+KEC E W SL E
Sbjct: 231 LTMQCELKAKECYEAWTSLTE 251


>ref|XP_003635892.1| Kinesin-4, partial [Medicago truncatula]
           gi|355501827|gb|AES83030.1| Kinesin-4, partial [Medicago
           truncatula]
          Length = 882

 Score =  149 bits (375), Expect = 3e-34
 Identities = 81/201 (40%), Positives = 113/201 (56%), Gaps = 27/201 (13%)
 Frame = +1

Query: 13  GVEFIEDSFFTGGDVIRTETSIGDTEEDGVLYQTARCGNCLYKFEELVAGNYIVDLHFAE 192
           GV+F+ D+FF GGDV  T  +I +  +   +YQ+AR G+  Y+ + L  G Y+VDLHF E
Sbjct: 51  GVKFLSDTFFDGGDVFLTNEAIVEGGDYPSIYQSARVGSFSYRIDNLPPGQYLVDLHFVE 110

Query: 193 IIFINGPSGMRVFNVFIQEEKVVSAIDIYDLVGSNKPLMLSGLKAFVNGNGGLSIRFEGV 372
           II +NGP GMRVFNV+IQEEKV+S +DIY  VG NKPL L   +A V  +G + IRFE +
Sbjct: 111 IINVNGPKGMRVFNVYIQEEKVLSELDIYAAVGVNKPLQLIDCRATVKDDGVILIRFESL 170

Query: 373 TGKSVISGISVKKDHQAE---------------------------YQFKELTETKRNLQW 471
            G+ V+SGI +++  +                              Q K   + +  ++ 
Sbjct: 171 NGRPVVSGICIRRASKESVPPVPSDFIECNYCAAQIEIPSSQIKVMQTKSTAKYENKIKE 230

Query: 472 FKKEYELKSKECQETWKSLRE 534
              + ELK+KEC E W SL E
Sbjct: 231 LTMQCELKAKECYEAWTSLTE 251


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