BLASTX nr result

ID: Coptis25_contig00037458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037458
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-22
emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]    70   5e-20
emb|CAN62538.1| hypothetical protein VITISV_031159 [Vitis vinifera]    69   1e-19
emb|CAN69872.1| hypothetical protein VITISV_032285 [Vitis vinifera]    73   1e-19
emb|CAN67449.1| hypothetical protein VITISV_031400 [Vitis vinifera]    68   3e-19

>ref|XP_002334548.1| predicted protein [Populus trichocarpa] gi|222873215|gb|EEF10346.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 85.1 bits (209), Expect(2) = 2e-22
 Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = -1

Query: 359 RQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 183
           +QG + +I Y+N + S W E+D+Y+D+   C+ D   LK+  ER RI+ FLAGLN  F+ 
Sbjct: 124 KQGNMMVIEYYNIMKSFWLELDYYQDFKMQCSEDAVILKNYVERERIFEFLAGLNIEFDQ 183

Query: 182 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAMRVREENLEIP 57
            RVQILG++  P SL +V++ I+ E+ RRT M      LE+P
Sbjct: 184 MRVQILGKESMP-SLNKVFSVIRAEEGRRTVM------LEVP 218



 Score = 45.8 bits (107), Expect(2) = 2e-22
 Identities = 21/52 (40%), Positives = 33/52 (63%)
 Frame = -3

Query: 516 WNRENLTVSSWLIHSMHPSISKGFMFLKTEKEISDAVAQTYSQKGNFAKLYD 361
           W+ E+  + SWL +S+ P +   +MFL T K+I DAV Q YS+  + A +Y+
Sbjct: 64  WDEEDSMIMSWLWNSIMPEVCGPYMFLVTAKDIWDAVRQIYSKVKDAALIYE 115


>emb|CAN68990.1| hypothetical protein VITISV_015170 [Vitis vinifera]
          Length = 1285

 Score = 70.1 bits (170), Expect(2) = 5e-20
 Identities = 36/102 (35%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
 Frame = -1

Query: 359 RQGELSLIAYFNALSK-WEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 183
           RQGEL++  YFN L++ W+++D +E++   C  D    K   ER RIY+FL GLN + + 
Sbjct: 122 RQGELTVTQYFNTLNRYWQQLDLFEEHNWSCLGDGIKYKQIIERKRIYKFLIGLNKNLDE 181

Query: 182 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAMRVREENLEIP 57
            R +ILG +P   ++ E ++ ++ E+SR+  M   ++++  P
Sbjct: 182 VRGRILGSKPL-LNIREAFSEVRREESRKKIMMGSQDSVTNP 222



 Score = 52.4 bits (124), Expect(2) = 5e-20
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = -3

Query: 525 YKKWNRENLTVSSWLIHSMHPSISKGFMFLKTEKEISDAVAQTYSQKGNFAKLYD 361
           +K WN EN  V SWLI+SM   I + F+   T KEI DA  +TYS   N  +L++
Sbjct: 59  FKVWNAENNMVMSWLINSMTNDIGENFLLYGTAKEIWDAAKETYSNNENTLELFE 113


>emb|CAN62538.1| hypothetical protein VITISV_031159 [Vitis vinifera]
          Length = 1481

 Score = 69.3 bits (168), Expect(2) = 1e-19
 Identities = 34/97 (35%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
 Frame = -1

Query: 359 RQGELSLIAYFNALSK-WEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 183
           RQGE S+  Y+N L++ W+++D +E ++  C+ D A+ +   E+ R+++F  GLN   + 
Sbjct: 140 RQGEQSVTQYYNTLTRYWQQLDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDD 199

Query: 182 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAMRVREE 72
            R +I+G +P P SL EV++ ++ E+SR+  M   +E
Sbjct: 200 VRGRIMGIKPLP-SLREVFSEVRREESRKKVMMGSKE 235



 Score = 52.0 bits (123), Expect(2) = 1e-19
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = -3

Query: 525 YKKWNRENLTVSSWLIHSMHPSISKGFMFLKTEKEISDAVAQTYSQKGNFAKLY 364
           ++KW  EN  + SWLI+SM+  I + F+   T K+I DA  +TYS   N ++L+
Sbjct: 77  FRKWKIENSMIMSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENISELF 130


>emb|CAN69872.1| hypothetical protein VITISV_032285 [Vitis vinifera]
          Length = 843

 Score = 73.2 bits (178), Expect(2) = 1e-19
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
 Frame = -1

Query: 359 RQGELSLIAYFNAL-SKWEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 183
           +QG LS+  Y+N + S W E+D Y++    C  D    +   ER R+Y FLAGLN   + 
Sbjct: 210 KQGILSVTKYYNVIKSLWLELDQYQNLRMKCNIDATMHQEFIERERVYDFLAGLNVELDQ 269

Query: 182 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAM 87
            RVQI G++P P SL + +A ++GE+ RR  M
Sbjct: 270 VRVQIFGKEPLP-SLNKAFAIVRGEERRRNIM 300



 Score = 48.1 bits (113), Expect(2) = 1e-19
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = -3

Query: 516 WNRENLTVSSWLIHSMHPSISKGFMFLKTEKEISDAVAQTYSQKGNFAKLYD 361
           W+ E+  + SWL +SM   IS+  MFL T KEI ++V  TYS+  + A++Y+
Sbjct: 150 WDEEDSQIMSWLWNSMQSDISRTCMFLSTAKEIWESVCHTYSKVRDAAQMYE 201


>emb|CAN67449.1| hypothetical protein VITISV_031400 [Vitis vinifera]
          Length = 1618

 Score = 67.8 bits (164), Expect(2) = 3e-19
 Identities = 33/97 (34%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -1

Query: 359 RQGELSLIAYFNALSK-WEEIDHYEDYAPVCATDIASLKSRTERSRIYRFLAGLNSSFEY 183
           RQGE S+  Y+N L++ W+++D +E ++  C+ D A+ +   E+ R+++F  GLN   + 
Sbjct: 342 RQGEQSVTQYYNTLTRYWQQLDLFETHSWKCSDDAATYRKIVEQKRLFKFFLGLNRELDD 401

Query: 182 ARVQILGRQPAPTSLAEVYAYIQGEDSRRTAMRVREE 72
            R +I+G +P P SL E ++ ++ E+SR+  M   +E
Sbjct: 402 VRGRIMGIKPLP-SLREAFSEVRREESRKKVMMGSKE 437



 Score = 52.0 bits (123), Expect(2) = 3e-19
 Identities = 21/54 (38%), Positives = 34/54 (62%)
 Frame = -3

Query: 525 YKKWNRENLTVSSWLIHSMHPSISKGFMFLKTEKEISDAVAQTYSQKGNFAKLY 364
           ++KW  EN  + SWLI+SM+  I + F+  +T K+I D   +TYS   N ++L+
Sbjct: 279 FRKWKIENSMIMSWLINSMNNDIGENFLLFRTAKDIWDVAKETYSSSENISELF 332


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