BLASTX nr result

ID: Coptis25_contig00037437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037437
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]              140   1e-31
ref|NP_849784.1| protein argonaute [Arabidopsis thaliana] gi|334...   140   1e-31
ref|NP_175274.1| protein argonaute [Arabidopsis thaliana] gi|113...   140   1e-31
dbj|BAE99844.1| hypothetical protein [Arabidopsis thaliana]           140   1e-31
emb|CBI35296.3| unnamed protein product [Vitis vinifera]              139   2e-31

>gb|AAF79718.1|AC020889_26 T1N15.2 [Arabidopsis thaliana]
          Length = 1123

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = -1

Query: 301 KGLKFPARPGAGTVGMKCVVKANHFLVKLKETDLHHYDVSINPEVISRGVNRAVMKQLVS 122
           K  KFP RPG G  G +C+VKANHF  +L + DLHHYDV+I PEV SRGVNRAVMKQLV 
Sbjct: 213 KAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLVD 272

Query: 121 EFGTSHLGGKQPVYDGRKGLFTAGALPFNSKDFVMKLIDK 2
            +  SHLG + P YDGRK L+TAG LPFNSK+F + L+D+
Sbjct: 273 NYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDE 312


>ref|NP_849784.1| protein argonaute [Arabidopsis thaliana]
           gi|334183151|ref|NP_001185169.1| protein argonaute
           [Arabidopsis thaliana] gi|332194167|gb|AEE32288.1|
           protein argonaute [Arabidopsis thaliana]
           gi|332194168|gb|AEE32289.1| protein argonaute
           [Arabidopsis thaliana]
          Length = 1050

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = -1

Query: 301 KGLKFPARPGAGTVGMKCVVKANHFLVKLKETDLHHYDVSINPEVISRGVNRAVMKQLVS 122
           K  KFP RPG G  G +C+VKANHF  +L + DLHHYDV+I PEV SRGVNRAVMKQLV 
Sbjct: 175 KAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLVD 234

Query: 121 EFGTSHLGGKQPVYDGRKGLFTAGALPFNSKDFVMKLIDK 2
            +  SHLG + P YDGRK L+TAG LPFNSK+F + L+D+
Sbjct: 235 NYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDE 274


>ref|NP_175274.1| protein argonaute [Arabidopsis thaliana]
           gi|11386626|sp|O04379.1|AGO1_ARATH RecName: Full=Protein
           argonaute 1 gi|5733867|gb|AAD49755.1|AC007932_3
           Identical to Argonaute protein from Arabidopsis thaliana
           gb|U91995. EST gb|AA720232 comes from this gene
           [Arabidopsis thaliana] gi|2149640|gb|AAC18440.1|
           Argonaute protein [Arabidopsis thaliana]
           gi|24030354|gb|AAN41341.1| putative leaf development
           protein Argonaute [Arabidopsis thaliana]
           gi|332194166|gb|AEE32287.1| protein argonaute
           [Arabidopsis thaliana]
          Length = 1048

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = -1

Query: 301 KGLKFPARPGAGTVGMKCVVKANHFLVKLKETDLHHYDVSINPEVISRGVNRAVMKQLVS 122
           K  KFP RPG G  G +C+VKANHF  +L + DLHHYDV+I PEV SRGVNRAVMKQLV 
Sbjct: 175 KAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLVD 234

Query: 121 EFGTSHLGGKQPVYDGRKGLFTAGALPFNSKDFVMKLIDK 2
            +  SHLG + P YDGRK L+TAG LPFNSK+F + L+D+
Sbjct: 235 NYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDE 274


>dbj|BAE99844.1| hypothetical protein [Arabidopsis thaliana]
          Length = 348

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = -1

Query: 301 KGLKFPARPGAGTVGMKCVVKANHFLVKLKETDLHHYDVSINPEVISRGVNRAVMKQLVS 122
           K  KFP RPG G  G +C+VKANHF  +L + DLHHYDV+I PEV SRGVNRAVMKQLV 
Sbjct: 175 KAFKFPMRPGKGQSGKRCIVKANHFFAELPDKDLHHYDVTITPEVTSRGVNRAVMKQLVD 234

Query: 121 EFGTSHLGGKQPVYDGRKGLFTAGALPFNSKDFVMKLIDK 2
            +  SHLG + P YDGRK L+TAG LPFNSK+F + L+D+
Sbjct: 235 NYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDE 274


>emb|CBI35296.3| unnamed protein product [Vitis vinifera]
          Length = 1038

 Score =  139 bits (350), Expect = 2e-31
 Identities = 72/139 (51%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
 Frame = -1

Query: 394 SEAGSSYTSGDVLSSEMEK--------KLXXXXXXXXSQKGLKFPARPGAGTVGMKCVVK 239
           SEA SS  + + L+ +++K                  S K ++FP RPG G  G KC+VK
Sbjct: 142 SEASSSRQAAESLTQQLQKVSIQQEVPPSQAIQPVAPSSKSMRFPLRPGKGVTGKKCIVK 201

Query: 238 ANHFLVKLKETDLHHYDVSINPEVISRGVNRAVMKQLVSEFGTSHLGGKQPVYDGRKGLF 59
           ANHF  +L + DLH YDVSINPEV SRGVNRAVM+QLV  +  SHLG + P YDGRK L+
Sbjct: 202 ANHFFAELPDKDLHQYDVSINPEVTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLY 261

Query: 58  TAGALPFNSKDFVMKLIDK 2
           TAG LPF SK+F++ LID+
Sbjct: 262 TAGPLPFISKEFMITLIDE 280


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