BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037431
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG44352.1|AF233039_1 reverse transcriptase-like protein [Spi...    59   4e-07
gb|ACZ81623.1| reverse transcriptase [Fragaria x ananassa]             59   5e-07
emb|CAN63660.1| hypothetical protein VITISV_008416 [Vitis vinifera]    59   5e-07
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]    58   9e-07
emb|CAD11851.1| reverse transcriptase [Brassica oleracea var. me...    58   9e-07

>gb|AAG44352.1|AF233039_1 reverse transcriptase-like protein [Spiranthes sinensis]
          Length = 94

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +1

Query: 1   VKIVFLHDDQEEEMCVQQRECFIKMDRDNMVCKLRKSFCSLTQFPRQWY 147
           VK  FLHDD EEE+ ++Q E F+   ++ MVC+L+KS   L Q PRQWY
Sbjct: 4   VKTAFLHDDLEEELYMEQPEGFLVKGKEGMVCRLKKSLYGLKQAPRQWY 52


>gb|ACZ81623.1| reverse transcriptase [Fragaria x ananassa]
          Length = 89

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +1

Query: 13  FLHDDQEEEMCVQQRECFIKMDRDNMVCKLRKSFCSLTQFPRQWY 147
           FLH D EE++C+ Q E F++  ++N+VC+L+KS   L Q PRQWY
Sbjct: 3   FLHGDLEEDICMSQPEGFVETGKENLVCRLKKSLYGLKQLPRQWY 47


>emb|CAN63660.1| hypothetical protein VITISV_008416 [Vitis vinifera]
          Length = 1001

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +1

Query: 1   VKIVFLHDDQEEEMCVQQRECFIKMDRDNMVCKLRKSFCSLTQFPRQWY 147
           VK  FLH D EE++ + Q E FI   ++N+VCKLRKS   L Q PRQWY
Sbjct: 694 VKTTFLHGDLEEDLYMNQPEGFIVQGQENLVCKLRKSLYDLKQAPRQWY 742


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +1

Query: 1    VKIVFLHDDQEEEMCVQQRECFIKMDRDNMVCKLRKSFCSLTQFPRQWY 147
            VK  FLH D EE++ + Q E FI   ++N+VCKLRKS   L Q PRQWY
Sbjct: 876  VKTAFLHSDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYDLKQAPRQWY 924


>emb|CAD11851.1| reverse transcriptase [Brassica oleracea var. medullosa]
          Length = 89

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +1

Query: 13  FLHDDQEEEMCVQQRECFIKMDRDNMVCKLRKSFCSLTQFPRQWYM 150
           FLH D EEE+ ++Q E ++K  ++N+VC+L+KS   L Q PRQWYM
Sbjct: 3   FLHGDLEEEIYMEQPEGYVKKGKENLVCRLKKSLYGLKQAPRQWYM 48