BLASTX nr result

ID: Coptis25_contig00037420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037420
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318355.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-09
gb|ACJ03066.1| M18S-3Ap [Malus floribunda]                             49   2e-09
gb|AEQ27751.1| receptor-like protein [Malus micromalus]                49   2e-09
gb|ACJ03074.1| HcrVf4 [Malus floribunda]                               49   2e-09
gb|AEQ27752.1| receptor-like protein [Malus micromalus]                49   2e-09

>ref|XP_002318355.1| predicted protein [Populus trichocarpa] gi|222859028|gb|EEE96575.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +2

Query: 26  RGLQIINLSTNNLTGVIPSLFGXXXXXXXXXXXXXKIYGELPLSLNKCEK*EF 184
           +GL ++NL+ NNL+G IPS  G             K+YGELP+SL  C   +F
Sbjct: 453 KGLVVLNLANNNLSGKIPSSVGSLFLLQTLSLHNNKLYGELPVSLKNCSMLKF 505



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = +1

Query: 175 VRILDLGENGFSGNIPSWMG-GLPSLNILRMRLNKFDGSL 291
           ++ LDLGEN  SG IP+W+G  L SL  L ++ N+F GS+
Sbjct: 503 LKFLDLGENRLSGEIPAWIGESLSSLMFLSLQSNEFIGSI 542


>gb|ACJ03066.1| M18S-3Ap [Malus floribunda]
          Length = 1045

 Score = 49.3 bits (116), Expect(2) = 2e-09
 Identities = 22/38 (57%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +1

Query: 181 ILDLGENGFSGNIPSWMG-GLPSLNILRMRLNKFDGSL 291
           ++DLGENGFSG+IP W+G  L  L IL +R NKF+G +
Sbjct: 739 VVDLGENGFSGSIPIWIGKSLSELQILNLRSNKFEGDI 776



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 32  LQIINLSTNNLTGVIPSLFGXXXXXXXXXXXXXKIYGELPLSLNKCEK 175
           L  +NL  NNLTG +P   G              +YGELP SL  C +
Sbjct: 689 LSFLNLENNNLTGNVPMSMGYLDWLESLHLRNNHLYGELPHSLQNCTR 736


>gb|AEQ27751.1| receptor-like protein [Malus micromalus]
          Length = 980

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +1

Query: 181 ILDLGENGFSGNIPSWMG-GLPSLNILRMRLNKFDGSL 291
           ++DL ENGFSG+IP W+G  L  LN+L +R NKF+G +
Sbjct: 678 VVDLSENGFSGSIPIWIGKSLSGLNVLNLRSNKFEGDI 715



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 32  LQIINLSTNNLTGVIPSLFGXXXXXXXXXXXXXKIYGELPLSLNKC 169
           L+ +NL  NNLTG +P   G              +YGELP SL  C
Sbjct: 628 LRFLNLENNNLTGNVPMSMGYLQYLGSLHLRNNHLYGELPHSLQNC 673


>gb|ACJ03074.1| HcrVf4 [Malus floribunda]
          Length = 962

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +1

Query: 181 ILDLGENGFSGNIPSWMG-GLPSLNILRMRLNKFDGSL 291
           ++DL ENGFSG+IP W+G  L  LN+L +R NKF+G +
Sbjct: 660 VVDLSENGFSGSIPIWIGKSLSGLNVLNLRSNKFEGDI 697



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 32  LQIINLSTNNLTGVIPSLFGXXXXXXXXXXXXXKIYGELPLSLNKC 169
           L+ +NL  NNLTG +P   G              +YGELP SL  C
Sbjct: 610 LRFLNLENNNLTGNVPMSMGYLQYLGSLHLRNNHLYGELPHSLQNC 655


>gb|AEQ27752.1| receptor-like protein [Malus micromalus]
          Length = 915

 Score = 48.9 bits (115), Expect(2) = 2e-09
 Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +1

Query: 181 ILDLGENGFSGNIPSWMG-GLPSLNILRMRLNKFDGSL 291
           ++DL ENGFSG+IP W+G  L  LN+L +R NKF+G +
Sbjct: 613 VVDLSENGFSGSIPIWIGKSLSGLNVLNLRSNKFEGDI 650



 Score = 37.4 bits (85), Expect(2) = 2e-09
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +2

Query: 32  LQIINLSTNNLTGVIPSLFGXXXXXXXXXXXXXKIYGELPLSLNKC 169
           L+ +NL  NNLTG +P   G              +YGELP SL  C
Sbjct: 563 LRFLNLENNNLTGNVPMSMGYLQYLGSLHLRNNHLYGELPHSLQNC 608


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