BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037418
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528160.1| pentatricopeptide repeat-containing protein,...   113   1e-23
emb|CBI27156.3| unnamed protein product [Vitis vinifera]              104   7e-21
ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containi...   104   7e-21
ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20

>ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532417|gb|EEF34211.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = -1

Query: 261 EKSNRDSLYLDKRGKLRSFNHXXXXXXXXXXXXXXGWKYGSGFVDGVFPVMSPTSQKILN 82
           EK  RD+L+LDKRGK +SFNH              GWKYGSGFVDG+FPV+SP +Q+IL+
Sbjct: 28  EKYKRDALFLDKRGKWQSFNHKKLSRKRCGSLRGQGWKYGSGFVDGIFPVLSPIAQQILS 87

Query: 81  FLQKEVNAETVWVSLDNLPLTHATWDD 1
           F+QKEV+  TVW +LD LP TH TWDD
Sbjct: 88  FIQKEVDPSTVWAALDTLPATHETWDD 114


>emb|CBI27156.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/87 (56%), Positives = 59/87 (67%)
 Frame = -1

Query: 261 EKSNRDSLYLDKRGKLRSFNHXXXXXXXXXXXXXXGWKYGSGFVDGVFPVMSPTSQKILN 82
           EK  RDSL++DKRGK RSFN               GWKYGSGFVDG+FPVMSP +Q+IL+
Sbjct: 86  EKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQILD 145

Query: 81  FLQKEVNAETVWVSLDNLPLTHATWDD 1
           F+QKE  +  +W SLD+L   H TWDD
Sbjct: 146 FVQKEERSNRIWGSLDSLSPNHTTWDD 172


>ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Vitis vinifera]
          Length = 587

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/87 (56%), Positives = 59/87 (67%)
 Frame = -1

Query: 261 EKSNRDSLYLDKRGKLRSFNHXXXXXXXXXXXXXXGWKYGSGFVDGVFPVMSPTSQKILN 82
           EK  RDSL++DKRGK RSFN               GWKYGSGFVDG+FPVMSP +Q+IL+
Sbjct: 48  EKGKRDSLFIDKRGKFRSFNFKKQSRKKGGSLRGRGWKYGSGFVDGIFPVMSPIAQQILD 107

Query: 81  FLQKEVNAETVWVSLDNLPLTHATWDD 1
           F+QKE  +  +W SLD+L   H TWDD
Sbjct: 108 FVQKEERSNRIWGSLDSLSPNHTTWDD 134


>ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/87 (54%), Positives = 62/87 (71%)
 Frame = -1

Query: 261 EKSNRDSLYLDKRGKLRSFNHXXXXXXXXXXXXXXGWKYGSGFVDGVFPVMSPTSQKILN 82
           EK  RDS+Y+DK G+LR+FNH              GWKYGSGFVDG+FPV+SPT+Q+IL+
Sbjct: 35  EKFKRDSVYIDKNGRLRNFNHKKVSRKKCGSLRGRGWKYGSGFVDGIFPVLSPTAQQILD 94

Query: 81  FLQKEVNAETVWVSLDNLPLTHATWDD 1
           +++K V +E++W SLD LP T   WDD
Sbjct: 95  YVEKGVESESIWGSLDMLPPTLDAWDD 121


>ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/87 (52%), Positives = 60/87 (68%)
 Frame = -1

Query: 261 EKSNRDSLYLDKRGKLRSFNHXXXXXXXXXXXXXXGWKYGSGFVDGVFPVMSPTSQKILN 82
           EKS RD LY+DKRGK R+FN               GWKYGSGFVDG+FPV+ P +Q+I+ 
Sbjct: 35  EKSRRDGLYVDKRGKFRTFNRKRLSRKRCGSLRGRGWKYGSGFVDGIFPVLGPLAQQIME 94

Query: 81  FLQKEVNAETVWVSLDNLPLTHATWDD 1
           F+++EV+   +W SLD LP T++TWDD
Sbjct: 95  FVREEVDYMGLWDSLDTLPATNSTWDD 121