BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037410
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              116   2e-24
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   113   1e-23
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   113   2e-23
emb|CAN81183.1| hypothetical protein VITISV_010634 [Vitis vinifera]   110   9e-23
emb|CCH50966.1| T4.5 [Malus x robusta]                                110   1e-22

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/102 (52%), Positives = 76/102 (74%)
 Frame = -3

Query: 427  WICLLLKDLHIPLSQSPQLHCDNISAIALANNPIFHARTKHVEIDYHYI*ELVINKAIDL 248
            W+  L +DL++ LS  P++ CDNIS+I+LA+NP+FH+RTKH+E+DYHY+ + V+ + + +
Sbjct: 1276 WLRSLFRDLNVFLS-CPRIWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAV 1334

Query: 247  KYLCTRDQLVDIFTKGLSTQRFHLLLSKLSVIPSPFSLKGGN 122
             Y+ T DQ  DIFTKGLSTQRF  L SKL V   P SL+G +
Sbjct: 1335 SYVSTADQTADIFTKGLSTQRFQFLASKLPVRARPLSLRGND 1376


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/100 (55%), Positives = 71/100 (71%)
 Frame = -3

Query: 427 WICLLLKDLHIPLSQSPQLHCDNISAIALANNPIFHARTKHVEIDYHYI*ELVINKAIDL 248
           WI  LLK+L IPL Q P L+CDN+S   LA NPI H+R KHVEIDYH++ E V+ K +D+
Sbjct: 227 WIQSLLKELFIPLFQPPVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDV 286

Query: 247 KYLCTRDQLVDIFTKGLSTQRFHLLLSKLSVIPSPFSLKG 128
           ++L + DQ+ DI TK LSTQ F  L SKL+V+  P  L+G
Sbjct: 287 RFLPSEDQVADILTKSLSTQHFLHLRSKLTVLSRPVCLRG 326


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/100 (54%), Positives = 73/100 (73%)
 Frame = -3

Query: 427  WICLLLKDLHIPLSQSPQLHCDNISAIALANNPIFHARTKHVEIDYHYI*ELVINKAIDL 248
            WI  LLK+L +PL Q P L+ DN+S   LA NP+ H+R KHVEIDYH++ E V+ K +D+
Sbjct: 1021 WIQSLLKELFVPLFQPPVLYYDNLSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDV 1080

Query: 247  KYLCTRDQLVDIFTKGLSTQRFHLLLSKLSVIPSPFSLKG 128
            ++L ++DQ+VDI TK LSTQRF  L SKL+V+  P  L+G
Sbjct: 1081 RFLPSKDQVVDILTKALSTQRFLHLRSKLTVLSRPMCLRG 1120


>emb|CAN81183.1| hypothetical protein VITISV_010634 [Vitis vinifera]
          Length = 519

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/100 (56%), Positives = 72/100 (72%)
 Frame = -3

Query: 427 WICLLLKDLHIPLSQSPQLHCDNISAIALANNPIFHARTKHVEIDYHYI*ELVINKAIDL 248
           WI  LL++LH+ LS  P L CDNISA  LA NP+ HARTKHVEIDYH+I E V+ + + +
Sbjct: 190 WIEFLLRELHVCLSHPPLLLCDNISATYLAANPMLHARTKHVEIDYHFIRERVMCRTLRI 249

Query: 247 KYLCTRDQLVDIFTKGLSTQRFHLLLSKLSVIPSPFSLKG 128
           +Y  + DQLVD  TK LS+ RF  L  KL+++PSP SL+G
Sbjct: 250 QYTPSTDQLVDAMTKPLSSFRFCNLRCKLTILPSPLSLRG 289


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/100 (54%), Positives = 71/100 (71%)
 Frame = -3

Query: 427  WICLLLKDLHIPLSQSPQLHCDNISAIALANNPIFHARTKHVEIDYHYI*ELVINKAIDL 248
            W+C +L D+  PL ++P ++CDN S IALA NP+FHARTKHVEIDYHYI E V+   I +
Sbjct: 1558 WVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLGHIGV 1617

Query: 247  KYLCTRDQLVDIFTKGLSTQRFHLLLSKLSVIPSPFSLKG 128
            +++ +  Q+ DIFTK L+  RF  L SKLSV    FSL+G
Sbjct: 1618 QHVASLLQIADIFTKPLAADRFAALTSKLSVRSPSFSLRG 1657