BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037405
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-17
gb|ABK93461.1| unknown [Populus trichocarpa]                           59   8e-17
ref|XP_002866377.1| predicted protein [Arabidopsis lyrata subsp....    64   7e-16
ref|NP_974966.1| tRNA-splicing endonuclease subunit Sen2-2 [Arab...    64   1e-15
ref|NP_200831.1| tRNA-splicing endonuclease subunit Sen2-2 [Arab...    64   1e-15

>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 59.3 bits (142), Expect(2) = 8e-17
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +3

Query: 180 KNWVLRSEIKHGMEFMAYLHHPSLVLSEYTVIVLKGDGNTNTCLMA*YSLYSMVRLEDGV 359
           KNWVLR  +++G++F+AY HHPSLV SEY VIVL  +G+T   L      +  +RL   V
Sbjct: 131 KNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTGR-LRVWSDFHCTIRLCGSV 188

Query: 360 ANIVLVLHI 386
           A  +L+L++
Sbjct: 189 AKTLLILNV 197



 Score = 52.4 bits (124), Expect(2) = 8e-17
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = +1

Query: 4   YELSLEGAFCLCYSFKRFEIRWEEKCLKNNNILWVLMKLLR*LFPILYKAYS 159
           ++L LE AF LCYS K  +I  E+  +KN+  LW+ MKL +  FP  YKAYS
Sbjct: 75  FQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYS 126


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 59.3 bits (142), Expect(2) = 8e-17
 Identities = 32/69 (46%), Positives = 46/69 (66%)
 Frame = +3

Query: 180 KNWVLRSEIKHGMEFMAYLHHPSLVLSEYTVIVLKGDGNTNTCLMA*YSLYSMVRLEDGV 359
           KNWVLR  +++G++F+AY HHPSLV SEY VIVL  +G+T   L      +  +RL   V
Sbjct: 131 KNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTGR-LRVWSDFHCTIRLCGSV 188

Query: 360 ANIVLVLHI 386
           A  +L+L++
Sbjct: 189 AKTLLILNV 197



 Score = 52.4 bits (124), Expect(2) = 8e-17
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = +1

Query: 4   YELSLEGAFCLCYSFKRFEIRWEEKCLKNNNILWVLMKLLR*LFPILYKAYS 159
           ++L LE AF LCYS K  +I  E+  +KN+  LW+ MKL +  FP  YKAYS
Sbjct: 75  FQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYKAYS 126


>ref|XP_002866377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312212|gb|EFH42636.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score = 64.3 bits (155), Expect(2) = 7e-16
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 177 AKNWVLRSEIKHGMEFMAYLHHPSLVLSEYTVIVLKGDGNTNTCLMA*YSLYSMVRLEDG 356
           +KNWVLRS +++G++F+AY HHPSLV SEY+V+V  GD +    L     ++  VRL   
Sbjct: 135 SKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDR---LRVWSDIHCAVRLSGS 191

Query: 357 VANIVLVLHI 386
           VA  +L L++
Sbjct: 192 VAKTLLTLYV 201



 Score = 44.3 bits (103), Expect(2) = 7e-16
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +1

Query: 7   ELSLEGAFCLCYSFKRFEIRWEEKCLKNNNILWVLMKLLR*LFPILYKAYS 159
           +LS E AF L Y+ K  +I  + +CL+N    W+ MK  R  FP+ +KAYS
Sbjct: 81  QLSFEEAFYLLYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPMFFKAYS 131


>ref|NP_974966.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
           gi|332009914|gb|AED97297.1| tRNA-splicing endonuclease
           subunit Sen2-2 [Arabidopsis thaliana]
          Length = 255

 Score = 64.3 bits (155), Expect(2) = 1e-15
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 177 AKNWVLRSEIKHGMEFMAYLHHPSLVLSEYTVIVLKGDGNTNTCLMA*YSLYSMVRLEDG 356
           +KNWVLRS +++G++F+AY HHPSLV SEY+V+V  GD +    L     ++  VRL   
Sbjct: 135 SKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDR---LRVWSDIHCAVRLSGS 191

Query: 357 VANIVLVLHI 386
           VA  +L L++
Sbjct: 192 VAKTLLTLYV 201



 Score = 43.5 bits (101), Expect(2) = 1e-15
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +1

Query: 7   ELSLEGAFCLCYSFKRFEIRWEEKCLKNNNILWVLMKLLR*LFPILYKAYS 159
           +LS E AF L Y+ K  +I  + +CL+N    W+ MK  R  FP+ +KAYS
Sbjct: 81  QLSFEEAFFLHYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPMFFKAYS 131


>ref|NP_200831.1| tRNA-splicing endonuclease subunit Sen2-2 [Arabidopsis thaliana]
           gi|75180395|sp|Q9LSS3.1|SEN22_ARATH RecName:
           Full=tRNA-splicing endonuclease subunit Sen2-2; AltName:
           Full=tRNA-intron endonuclease Sen2-2; Short=AtSen2
           gi|8885574|dbj|BAA97504.1| tRNA intron endonuclease
           [Arabidopsis thaliana] gi|28393426|gb|AAO42135.1|
           putative tRNA intron endonuclease [Arabidopsis thaliana]
           gi|28827218|gb|AAO50453.1| putative tRNA intron
           endonuclease [Arabidopsis thaliana]
           gi|332009913|gb|AED97296.1| tRNA-splicing endonuclease
           subunit Sen2-2 [Arabidopsis thaliana]
          Length = 250

 Score = 64.3 bits (155), Expect(2) = 1e-15
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = +3

Query: 177 AKNWVLRSEIKHGMEFMAYLHHPSLVLSEYTVIVLKGDGNTNTCLMA*YSLYSMVRLEDG 356
           +KNWVLRS +++G++F+AY HHPSLV SEY+V+V  GD +    L     ++  VRL   
Sbjct: 130 SKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDR---LRVWSDIHCAVRLSGS 186

Query: 357 VANIVLVLHI 386
           VA  +L L++
Sbjct: 187 VAKTLLTLYV 196



 Score = 43.5 bits (101), Expect(2) = 1e-15
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +1

Query: 7   ELSLEGAFCLCYSFKRFEIRWEEKCLKNNNILWVLMKLLR*LFPILYKAYS 159
           +LS E AF L Y+ K  +I  + +CL+N    W+ MK  R  FP+ +KAYS
Sbjct: 76  QLSFEEAFFLHYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPMFFKAYS 126