BLASTX nr result

ID: Coptis25_contig00037389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037389
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...   103   2e-20
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]   103   2e-20
ref|XP_002873109.1| hypothetical protein ARALYDRAFT_487149 [Arab...   102   4e-20
ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thal...    99   5e-19
ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu...    98   6e-19

>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/85 (55%), Positives = 63/85 (74%)
 Frame = +2

Query: 2   LVSSNGQFEMKLGDNFIGLYSTFEQDSKQIYWKHTAMQAKAEIVQGNGPLYSQISLHGYL 181
           LVSSNG + M+LG++FIGLY  F+++  QIYWKH A++AKAEIV+G GP+Y ++   G+L
Sbjct: 173 LVSSNGLYSMRLGEDFIGLYENFKENPDQIYWKHGALEAKAEIVKGQGPIYIRLDSGGFL 232

Query: 182 GTYQTENAPVDVLPFDSFQDPLLEF 256
           G YQ  + PVDV  F SFQ P+  F
Sbjct: 233 GMYQIGSTPVDVEAFYSFQHPIAGF 257


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/85 (55%), Positives = 63/85 (74%)
 Frame = +2

Query: 2   LVSSNGQFEMKLGDNFIGLYSTFEQDSKQIYWKHTAMQAKAEIVQGNGPLYSQISLHGYL 181
           LVSSNG + M+LG++FIGLY  F+++  QIYWKH A++AKAEIV+G GP+Y ++   G+L
Sbjct: 173 LVSSNGLYSMRLGEDFIGLYENFKENPDQIYWKHGALEAKAEIVKGQGPIYIRLDSGGFL 232

Query: 182 GTYQTENAPVDVLPFDSFQDPLLEF 256
           G YQ  + PVDV  F SFQ P+  F
Sbjct: 233 GMYQIGSTPVDVEAFYSFQHPIAGF 257


>ref|XP_002873109.1| hypothetical protein ARALYDRAFT_487149 [Arabidopsis lyrata subsp.
           lyrata] gi|297318946|gb|EFH49368.1| hypothetical protein
           ARALYDRAFT_487149 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/82 (54%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LVSSNGQFEMKLGDNFIGLYSTFEQDSKQIYWKHTAMQAKAEIVQGNGPLYSQISLHGYL 181
           LVS NG + M+LG +FIGLY+   +DS+Q YWKH+A+QAKA++  G GP+ ++I+ +GYL
Sbjct: 173 LVSPNGLYSMRLGSDFIGLYAKVSEDSQQFYWKHSALQAKAKVKDGAGPILARINPNGYL 232

Query: 182 GTYQTENAPVDVLPFDSFQDPL 247
           G YQT N P+DV  F+SFQ P+
Sbjct: 233 GMYQTGNIPIDVEAFNSFQRPV 254


>ref|NP_195990.1| PAN domain-containing protein [Arabidopsis thaliana]
           gi|75181333|sp|Q9LZR8.1|Y5370_ARATH RecName: Full=PAN
           domain-containing protein At5g03700; Flags: Precursor
           gi|7340655|emb|CAB82935.1| S-receptor kinase-like
           protein [Arabidopsis thaliana]
           gi|332003261|gb|AED90644.1| PAN domain-containing
           protein [Arabidopsis thaliana]
          Length = 482

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/82 (52%), Positives = 63/82 (76%)
 Frame = +2

Query: 2   LVSSNGQFEMKLGDNFIGLYSTFEQDSKQIYWKHTAMQAKAEIVQGNGPLYSQISLHGYL 181
           LVS NG + M+LG +FIGLY+   ++S+Q YWKH+A+QAKA++  G GP+ ++I+ +GYL
Sbjct: 173 LVSPNGLYSMRLGSDFIGLYAKVSEESQQFYWKHSALQAKAKVKDGAGPILARINPNGYL 232

Query: 182 GTYQTENAPVDVLPFDSFQDPL 247
           G YQT + P+DV  F+SFQ P+
Sbjct: 233 GMYQTGSIPIDVEAFNSFQRPV 254


>ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis]
           gi|223531987|gb|EEF33799.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 491

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 41/86 (47%), Positives = 63/86 (73%)
 Frame = +2

Query: 2   LVSSNGQFEMKLGDNFIGLYSTFEQDSKQIYWKHTAMQAKAEIVQGNGPLYSQISLHGYL 181
           LVS NG + ++LG+ F+ LY+ F+ +S Q+YWKH A++A+A+IV+G GPL +++   GYL
Sbjct: 169 LVSLNGVYSLRLGETFMALYAKFDHNSNQMYWKHNALEARADIVEGKGPLLARVESDGYL 228

Query: 182 GTYQTENAPVDVLPFDSFQDPLLEFV 259
           G YQ E APVD+  F+S+Q  +  F+
Sbjct: 229 GMYQNETAPVDIQAFNSYQRRISRFL 254


Top