BLASTX nr result

ID: Coptis25_contig00037376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037376
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526550.1| PREDICTED: uncharacterized protein LOC100781...    57   2e-06
ref|XP_003522767.1| PREDICTED: uncharacterized protein LOC100798...    56   3e-06
ref|NP_001030679.1| uncharacterized protein [Arabidopsis thalian...    55   8e-06

>ref|XP_003526550.1| PREDICTED: uncharacterized protein LOC100781025 [Glycine max]
          Length = 189

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = -3

Query: 212 VELASGKSVIKYHSPSIVFIQLYXXXXXXXXXXXFEKERVSVWPNTQSS 66
           VELA+GK VI YHSP+I+ IQ+Y           +EKE++SVWP T SS
Sbjct: 138 VELATGKGVINYHSPAIILIQIYFVAAVGAVFVKYEKEKISVWPQTDSS 186


>ref|XP_003522767.1| PREDICTED: uncharacterized protein LOC100798145 [Glycine max]
          Length = 188

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -3

Query: 212 VELASGKSVIKYHSPSIVFIQLYXXXXXXXXXXXFEKERVSVWPNTQSS 66
           VELA+GK VI YH+P+I+ IQ+Y           +EKE++SVWP T SS
Sbjct: 137 VELATGKGVINYHTPAIILIQIYFVAAVGAVFVKYEKEKISVWPQTDSS 185


>ref|NP_001030679.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15795154|dbj|BAB03142.1| unnamed protein product
           [Arabidopsis thaliana] gi|20466806|gb|AAM20720.1|
           FKBP-type peptidyl-prolyl cis-trans isomerase, putative
           [Arabidopsis thaliana] gi|23198246|gb|AAN15650.1|
           FKBP-type peptidyl-prolyl cis-trans isomerase, putative
           [Arabidopsis thaliana] gi|51968538|dbj|BAD42961.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51968786|dbj|BAD43085.1| hypothetical protein
           [Arabidopsis thaliana] gi|51968894|dbj|BAD43139.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|51971535|dbj|BAD44432.1| hypothetical protein
           [Arabidopsis thaliana] gi|51971729|dbj|BAD44529.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|229609699|gb|ACQ83465.1| stress-enhanced protein 4
           [Arabidopsis thaliana] gi|332641664|gb|AEE75185.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 186

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/44 (54%), Positives = 31/44 (70%)
 Frame = -3

Query: 212 VELASGKSVIKYHSPSIVFIQLYXXXXXXXXXXXFEKERVSVWP 81
           VELA+GKSV+ YH+PS+VF+Q+Y            EKE+VSVWP
Sbjct: 141 VELATGKSVLNYHTPSVVFLQIYFVAAVSAMFVKIEKEKVSVWP 184


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