BLASTX nr result

ID: Coptis25_contig00037372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037372
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 95   7e-18
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    73   2e-11
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]    72   4e-11
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]    71   1e-10
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]    64   1e-08

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/92 (51%), Positives = 68/92 (73%)
 Frame = +2

Query: 68  SHQHQLKNKLQATKKKGNDSIREFLQKIKEISDSLAAAGVIISDADLVSYVYNGLPSEYE 247
           +H H L++K+Q T  KG+ S+ +FL  IKEIS+ LAAAG  +S++DLV+Y+ +GLP EYE
Sbjct: 376 THVHSLRSKIQ-TIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYE 434

Query: 248 AFCAAVTVRKEQVLFDELHNLLLSEEITVSER 343
           +F  ++  R E V  DELH LLLS+EI++ +R
Sbjct: 435 SFVDSIETRNESVTADELHGLLLSKEISLQKR 466


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
 Frame = +2

Query: 17  LAFYSIYIFSAGYERYGSHQ-----HQLKNKLQATKKKGNDSIREFLQKIKEISDSLAAA 181
           L F  +++     E+Y + Q      Q K +LQ TKK G  +I E+L KIK   DSLA+ 
Sbjct: 97  LGFSHLFLSQYFLEQYFASQTRAKAKQFKTQLQHTKK-GGSTIDEYLAKIKVCVDSLASV 155

Query: 182 GVIISDADLVSYVYNGLPSEYEAFCAAVTVRKEQVLFDELHNLLLSEEITVSERNKSL 355
           GV +S  D V  + +GLP++YE+F  +V +R +    +E+  LL++ E  V + N SL
Sbjct: 156 GVSLSTKDHVESILDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSL 213


>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
          Length = 1211

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
 Frame = +2

Query: 35  YIFSAGYERYGSHQHQLKNKLQATK----KKGNDSIREFLQKIKEISDSLAAAGVIISDA 202
           ++F    E+Y + Q + K K   T+    KKG  +I E+L KI+   DSLA+ GV +S  
Sbjct: 65  FLFWGRLEQYFASQTRAKVKQFKTQFQHTKKGGSTIDEYLAKIRVCVDSLASIGVSLSTK 124

Query: 203 DLVSYVYNGLPSEYEAFCAAVTVRKEQVLFDELHNLLLSEEITVSERNKSL 355
           D V  + +GLPS+YE+F  ++T+R +    +E+  LL++ E  V + N SL
Sbjct: 125 DHVESILDGLPSDYESFVTSITLRNDDFSVEEIEVLLMAHESRVEKNNSSL 175


>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
          Length = 1138

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/92 (41%), Positives = 56/92 (60%)
 Frame = +2

Query: 80  QLKNKLQATKKKGNDSIREFLQKIKEISDSLAAAGVIISDADLVSYVYNGLPSEYEAFCA 259
           Q K +LQ TKK G  +I E+L KIK   DSLA+ GV +S  D    + NGLP++YE+F  
Sbjct: 136 QFKTQLQHTKK-GGSTIDEYLVKIKVCVDSLASVGVSLSTKDHFESILNGLPNDYESFVT 194

Query: 260 AVTVRKEQVLFDELHNLLLSEEITVSERNKSL 355
           ++T+R +    +E+  LL++    V + N SL
Sbjct: 195 SITLRNDDFSVEEIEALLMAHASRVEKNNSSL 226


>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
          Length = 864

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/89 (35%), Positives = 56/89 (62%)
 Frame = +2

Query: 80  QLKNKLQATKKKGNDSIREFLQKIKEISDSLAAAGVIISDADLVSYVYNGLPSEYEAFCA 259
           +L  KLQ  KK G  S  E++QK+K I +SLA  G ++S+ + + Y+++GL  EY  F  
Sbjct: 31  ELPTKLQMPKKDGL-SAGEYIQKLKSICNSLATIGELVSEKNHLIYLFSGLDXEYNPFVT 89

Query: 260 AVTVRKEQVLFDELHNLLLSEEITVSERN 346
           ++  R +Q   +++H+LLLS +  + ++N
Sbjct: 90  SIQNRSDQPTIEQIHSLLLSYDFHLEQQN 118


Top