BLASTX nr result

ID: Coptis25_contig00037357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037357
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809...   135   7e-30
emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]   122   7e-26
ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620...   118   9e-25
emb|CBI38138.3| unnamed protein product [Vitis vinifera]              116   3e-24

>ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|222862886|gb|EEF00393.1|
           predicted protein [Populus trichocarpa]
          Length = 1387

 Score =  136 bits (343), Expect = 3e-30
 Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 13/188 (6%)
 Frame = -1

Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408
           +QKLKQC+S + E+FVEEH +  EGG+KP KTLMF+EGC   LG TILLKG+HSD LK++
Sbjct: 263 NQKLKQCDSFHIERFVEEHVVVCEGGKKPRKTLMFIEGCPTCLGCTILLKGSHSDELKRV 322

Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLT--ICSAVDDECSQEHLPNTCKNAYSVNDSL 234
           K VV  AV++AYH+ILE SF VD +AMF +      V+     +H          V +S 
Sbjct: 323 KYVVQFAVIMAYHMILETSFLVDWKAMFSSEIFGGVVNTSSIDQHSSALETRIPCVEEST 382

Query: 233 SEIASSLTMDIPISEG----TSCNYNMDME--QNSAFTGFSNNITSYEKETGQNKHI--- 81
           +E  SS+ +DIPIS G     S N N+ +E  + + F+GFS+   S +K  G +  +   
Sbjct: 383 TETGSSI-IDIPISNGFHEEGSHNINIGLEGYEPAVFSGFSSLSASLKKVMGDSFPLVSS 441

Query: 80  --HRNMSD 63
             +R++SD
Sbjct: 442 SPYRSLSD 449


>ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809696 [Glycine max]
          Length = 1594

 Score =  135 bits (339), Expect = 7e-30
 Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 20/185 (10%)
 Frame = -1

Query: 584 QKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKIK 405
           QKL+ C+ +YFEKFVEEH    EGG+KP+KTLMF+EGC   LG TILLKG HSD LK+IK
Sbjct: 420 QKLRHCDFIYFEKFVEEHDAVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIK 479

Query: 404 SVVHSAVVLAYHLILEASFRVDQRAMFLTI-CSAVDDECSQEHLPNTCKNAYSVNDSLSE 228
            V+  AVV+AYHLILE SF VDQ+AMF TI   +V D    +    +C +A S+N S+  
Sbjct: 480 CVIRCAVVMAYHLILETSFLVDQKAMFSTIPAVSVADILPTD--KKSCDSA-SINSSIPS 536

Query: 227 IASS-----LTMDIPISEG----TSCNYNMDMEQNS----------AFTGFSNNITSYEK 105
           +  S     ++ DIPI  G     +   N+  E+ S           F+GFS   +S +K
Sbjct: 537 LEYSAENGIVSTDIPICSGLHEKNTNGLNLGSEEFSQFSCEPYNPAVFSGFSAISSSLKK 596

Query: 104 ETGQN 90
             G +
Sbjct: 597 VMGDS 601


>emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera]
          Length = 1517

 Score =  122 bits (305), Expect = 7e-26
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -1

Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408
           SQKLK C+S +FEKFVEEH    EGG+KP KTLMF+EGC    G TILLKG HS+ LK++
Sbjct: 316 SQKLKHCDSFHFEKFVEEHASVGEGGKKPSKTLMFIEGCPTRQGCTILLKGTHSEELKRV 375

Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLTI 315
           K V+  AVV+AYHLILE SF VDQ+AM  TI
Sbjct: 376 KCVMQCAVVMAYHLILETSFLVDQKAMISTI 406


>ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana]
           gi|5091620|gb|AAD39608.1|AC007454_7 Contains similarity
           to gi|836774 FAB1 protein from Saccharomyces cerevisiae
           genome gb|D50617 [Arabidopsis thaliana]
           gi|332193569|gb|AEE31690.1| protein FAB1D [Arabidopsis
           thaliana]
          Length = 1456

 Score =  118 bits (295), Expect = 9e-25
 Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
 Frame = -1

Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408
           SQKLK C+S   EK VEEH    E  +KP KTLMFLEGC   LG TILLKG HS+ LKK+
Sbjct: 345 SQKLKHCDSFRIEKIVEEHNAAGESDKKPTKTLMFLEGCPTRLGCTILLKGCHSERLKKV 404

Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLTICSAVDDECSQEHLPNTCKNAYSVNDSLSE 228
           K VV  + +LAYHL+LEASF  D+  MF TI +     C  E + N     +S + S  E
Sbjct: 405 KEVVQYSFILAYHLMLEASFLADRHTMFSTIFAKEATSCVVE-IEN-----FSPSPSPRE 458

Query: 227 IASSLTMDIPISEG-----TSCNYNMDMEQNSAFTGFSNNITSYE 108
            + S  +DIP+S G        N   D E+   +    +++ S+E
Sbjct: 459 -SPSEAVDIPVSNGFDEQTIQINGEADGEKVGTWESDGDHVFSHE 502


>emb|CBI38138.3| unnamed protein product [Vitis vinifera]
          Length = 1310

 Score =  116 bits (291), Expect = 3e-24
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = -1

Query: 578 LKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKIKSV 399
           LK C+S +FEKFVEEH    EGG+KP KTLMF+EGC    G TILLKG HS+ LK++K V
Sbjct: 286 LKHCDSFHFEKFVEEHASVGEGGKKPSKTLMFIEGCPTRQGCTILLKGTHSEELKRVKCV 345

Query: 398 VHSAVVLAYHLILEASFRVDQRAMFLTI 315
           +  AVV+AYHLILE SF VDQ+AM  TI
Sbjct: 346 MQCAVVMAYHLILETSFLVDQKAMISTI 373


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