BLASTX nr result
ID: Coptis25_contig00037357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00037357 (614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|2... 136 3e-30 ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809... 135 7e-30 emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera] 122 7e-26 ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620... 118 9e-25 emb|CBI38138.3| unnamed protein product [Vitis vinifera] 116 3e-24 >ref|XP_002326011.1| predicted protein [Populus trichocarpa] gi|222862886|gb|EEF00393.1| predicted protein [Populus trichocarpa] Length = 1387 Score = 136 bits (343), Expect = 3e-30 Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 13/188 (6%) Frame = -1 Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408 +QKLKQC+S + E+FVEEH + EGG+KP KTLMF+EGC LG TILLKG+HSD LK++ Sbjct: 263 NQKLKQCDSFHIERFVEEHVVVCEGGKKPRKTLMFIEGCPTCLGCTILLKGSHSDELKRV 322 Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLT--ICSAVDDECSQEHLPNTCKNAYSVNDSL 234 K VV AV++AYH+ILE SF VD +AMF + V+ +H V +S Sbjct: 323 KYVVQFAVIMAYHMILETSFLVDWKAMFSSEIFGGVVNTSSIDQHSSALETRIPCVEEST 382 Query: 233 SEIASSLTMDIPISEG----TSCNYNMDME--QNSAFTGFSNNITSYEKETGQNKHI--- 81 +E SS+ +DIPIS G S N N+ +E + + F+GFS+ S +K G + + Sbjct: 383 TETGSSI-IDIPISNGFHEEGSHNINIGLEGYEPAVFSGFSSLSASLKKVMGDSFPLVSS 441 Query: 80 --HRNMSD 63 +R++SD Sbjct: 442 SPYRSLSD 449 >ref|XP_003555422.1| PREDICTED: uncharacterized protein LOC100809696 [Glycine max] Length = 1594 Score = 135 bits (339), Expect = 7e-30 Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 20/185 (10%) Frame = -1 Query: 584 QKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKIK 405 QKL+ C+ +YFEKFVEEH EGG+KP+KTLMF+EGC LG TILLKG HSD LK+IK Sbjct: 420 QKLRHCDFIYFEKFVEEHDAVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIK 479 Query: 404 SVVHSAVVLAYHLILEASFRVDQRAMFLTI-CSAVDDECSQEHLPNTCKNAYSVNDSLSE 228 V+ AVV+AYHLILE SF VDQ+AMF TI +V D + +C +A S+N S+ Sbjct: 480 CVIRCAVVMAYHLILETSFLVDQKAMFSTIPAVSVADILPTD--KKSCDSA-SINSSIPS 536 Query: 227 IASS-----LTMDIPISEG----TSCNYNMDMEQNS----------AFTGFSNNITSYEK 105 + S ++ DIPI G + N+ E+ S F+GFS +S +K Sbjct: 537 LEYSAENGIVSTDIPICSGLHEKNTNGLNLGSEEFSQFSCEPYNPAVFSGFSAISSSLKK 596 Query: 104 ETGQN 90 G + Sbjct: 597 VMGDS 601 >emb|CAN65296.1| hypothetical protein VITISV_042325 [Vitis vinifera] Length = 1517 Score = 122 bits (305), Expect = 7e-26 Identities = 60/91 (65%), Positives = 70/91 (76%) Frame = -1 Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408 SQKLK C+S +FEKFVEEH EGG+KP KTLMF+EGC G TILLKG HS+ LK++ Sbjct: 316 SQKLKHCDSFHFEKFVEEHASVGEGGKKPSKTLMFIEGCPTRQGCTILLKGTHSEELKRV 375 Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLTI 315 K V+ AVV+AYHLILE SF VDQ+AM TI Sbjct: 376 KCVMQCAVVMAYHLILETSFLVDQKAMISTI 406 >ref|NP_174686.1| protein FAB1D [Arabidopsis thaliana] gi|5091620|gb|AAD39608.1|AC007454_7 Contains similarity to gi|836774 FAB1 protein from Saccharomyces cerevisiae genome gb|D50617 [Arabidopsis thaliana] gi|332193569|gb|AEE31690.1| protein FAB1D [Arabidopsis thaliana] Length = 1456 Score = 118 bits (295), Expect = 9e-25 Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 5/165 (3%) Frame = -1 Query: 587 SQKLKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKI 408 SQKLK C+S EK VEEH E +KP KTLMFLEGC LG TILLKG HS+ LKK+ Sbjct: 345 SQKLKHCDSFRIEKIVEEHNAAGESDKKPTKTLMFLEGCPTRLGCTILLKGCHSERLKKV 404 Query: 407 KSVVHSAVVLAYHLILEASFRVDQRAMFLTICSAVDDECSQEHLPNTCKNAYSVNDSLSE 228 K VV + +LAYHL+LEASF D+ MF TI + C E + N +S + S E Sbjct: 405 KEVVQYSFILAYHLMLEASFLADRHTMFSTIFAKEATSCVVE-IEN-----FSPSPSPRE 458 Query: 227 IASSLTMDIPISEG-----TSCNYNMDMEQNSAFTGFSNNITSYE 108 + S +DIP+S G N D E+ + +++ S+E Sbjct: 459 -SPSEAVDIPVSNGFDEQTIQINGEADGEKVGTWESDGDHVFSHE 502 >emb|CBI38138.3| unnamed protein product [Vitis vinifera] Length = 1310 Score = 116 bits (291), Expect = 3e-24 Identities = 57/88 (64%), Positives = 67/88 (76%) Frame = -1 Query: 578 LKQCESLYFEKFVEEHGIGREGGRKPVKTLMFLEGCHRPLGSTILLKGAHSDALKKIKSV 399 LK C+S +FEKFVEEH EGG+KP KTLMF+EGC G TILLKG HS+ LK++K V Sbjct: 286 LKHCDSFHFEKFVEEHASVGEGGKKPSKTLMFIEGCPTRQGCTILLKGTHSEELKRVKCV 345 Query: 398 VHSAVVLAYHLILEASFRVDQRAMFLTI 315 + AVV+AYHLILE SF VDQ+AM TI Sbjct: 346 MQCAVVMAYHLILETSFLVDQKAMISTI 373