BLASTX nr result

ID: Coptis25_contig00037352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037352
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30183.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2...   208   4e-52
ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809...   207   9e-52
ref|XP_003542579.1| PREDICTED: uncharacterized protein LOC100779...   207   1e-51
ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51

>emb|CBI30183.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  218 bits (555), Expect = 5e-55
 Identities = 108/141 (76%), Positives = 121/141 (85%), Gaps = 2/141 (1%)
 Frame = -3

Query: 552 YHDVVRVAEIENVLDISGVQTYVINSARVLFLNERPQPKSGKGVSHNCEVCGRSLLDPFR 373
           YHDVVRVAEI+ VLDISGVQTYVINSARVLFLNERPQPK+GKGVSH CE CGRSLLDPFR
Sbjct: 64  YHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKTGKGVSHICETCGRSLLDPFR 123

Query: 372 FCSLGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRK-ISKEEEQLREGTQHQIYPSTH 196
           FCSLGCKLV IKR GDA+F   + NE+ M+RGEG+SR+  S++E++LREG Q  IYP T 
Sbjct: 124 FCSLGCKLVGIKRNGDASFSLEAKNEMAMERGEGISRRESSRDEDELREGLQQDIYPPTP 183

Query: 195 SPPPNS-RRRKGIPHRAPFGS 136
            PPP+S RRRKGIPHRAPF S
Sbjct: 184 PPPPSSARRRKGIPHRAPFAS 204


>ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  208 bits (530), Expect = 4e-52
 Identities = 105/140 (75%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
 Frame = -3

Query: 552 YHDVVRVAEIENVLDISGVQTYVINSARVLFLNERPQPKSGKGVSHNCEVCGRSLLDPFR 373
           YHDVVRV+EI+ VLD SGVQTYVINSARVLFLNERPQPKSGKGV+H CE+CGRSLLDPFR
Sbjct: 67  YHDVVRVSEIQKVLDTSGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFR 126

Query: 372 FCSLGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKISKEEEQLREGTQHQIYPSTHS 193
           FCSLGCKL  +KR GDA+F   + NE  M R EG    IS EEE LREG+Q  IYP T  
Sbjct: 127 FCSLGCKLEGVKRNGDASFTLEAKNEALMGRREG----ISGEEEDLREGSQQDIYPPTPP 182

Query: 192 PPPNS-RRRKGIPHRAPFGS 136
           PPP+S RRRKGIPHRAPFGS
Sbjct: 183 PPPSSARRRKGIPHRAPFGS 202


>ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809455 [Glycine max]
          Length = 208

 Score =  207 bits (527), Expect = 9e-52
 Identities = 106/144 (73%), Positives = 119/144 (82%), Gaps = 5/144 (3%)
 Frame = -3

Query: 552 YHDVVRVAEIENVLDISGVQTYVINSARVLFLNERPQPKSGKGVSHNCEVCGRSLLDPFR 373
           YHDVVRVAEI+ VLDISGVQTYVINSARVLFLNERPQPKSGKGV+H CE+CGRSLLDPFR
Sbjct: 67  YHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFR 126

Query: 372 FCSLGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKI----SKEEEQLREGTQHQIYP 205
           FCSLGCKLV IKR GDA+F   + NE +    EGMSR+       +EE+LREG+Q  +YP
Sbjct: 127 FCSLGCKLVGIKRNGDASFTLDAKNEAS--TMEGMSRRSVSSRHHQEEELREGSQQDMYP 184

Query: 204 STHSPP-PNSRRRKGIPHRAPFGS 136
           +T SPP  N+RRRKGIPHRAPFGS
Sbjct: 185 ATPSPPASNARRRKGIPHRAPFGS 208


>ref|XP_003542579.1| PREDICTED: uncharacterized protein LOC100779070 [Glycine max]
          Length = 209

 Score =  207 bits (526), Expect = 1e-51
 Identities = 106/145 (73%), Positives = 119/145 (82%), Gaps = 6/145 (4%)
 Frame = -3

Query: 552 YHDVVRVAEIENVLDISGVQTYVINSARVLFLNERPQPKSGKGVSHNCEVCGRSLLDPFR 373
           YHDVVRVAEI+ VLDISGVQTYVINSARVLFLNERPQPKSGKGV+H CE+CGRSLLDPFR
Sbjct: 67  YHDVVRVAEIQTVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFR 126

Query: 372 FCSLGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKI----SKEEEQLREGTQHQIYP 205
           FCSLGCKLV IKR GDA+F   + NE +    EGMSR+       +EE+LREG+Q  +YP
Sbjct: 127 FCSLGCKLVGIKRNGDASFALDAKNEAS--TMEGMSRRSVSSRHHQEEELREGSQQDMYP 184

Query: 204 STHSPP--PNSRRRKGIPHRAPFGS 136
           +T SPP   N+RRRKGIPHRAPFGS
Sbjct: 185 ATPSPPASSNARRRKGIPHRAPFGS 209


>ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|222845422|gb|EEE82969.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  206 bits (524), Expect = 2e-51
 Identities = 106/143 (74%), Positives = 118/143 (82%), Gaps = 4/143 (2%)
 Frame = -3

Query: 552 YHDVVRVAEIENVLDISGVQTYVINSARVLFLNERPQPKSG--KGVSHNCEVCGRSLLDP 379
           YHDVVRVAEI+ VLDI+GVQTYVINSARVLFLNERPQPKS   KGV H CE+CGRSLLDP
Sbjct: 67  YHDVVRVAEIQKVLDITGVQTYVINSARVLFLNERPQPKSSTSKGVPHLCEICGRSLLDP 126

Query: 378 FRFCSLGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKI-SKEEEQLREGTQHQIYPS 202
           FRFCSLGCKLVRIK  GDATF   + +E   +  EGM R++ SKEEE+LREG+Q  +Y S
Sbjct: 127 FRFCSLGCKLVRIKNNGDATFNLSTKDEEVGEMREGMGRRLPSKEEEELREGSQQDMYTS 186

Query: 201 THSPP-PNSRRRKGIPHRAPFGS 136
           T +PP  NSRRRKGIPHRAPFGS
Sbjct: 187 TLTPPHSNSRRRKGIPHRAPFGS 209


Top