BLASTX nr result

ID: Coptis25_contig00037348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037348
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                       78   6e-13
emb|CAN64580.1| hypothetical protein VITISV_002159 [Vitis vinifera]    77   1e-12
emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]    77   1e-12
emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera]    77   1e-12
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]    77   2e-12

>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)
 Frame = -3

Query: 205  NPVQHDRTRHIEVDRYFLRDKVTSGKICVLYVPTSQ*LANFLTKALSSRLFLEILPTLGM 26
            NPVQHDRT+H+EVDR+F+++K+    I   +VPT + LA+ LTKALS++ F + L  LG+
Sbjct: 1114 NPVQHDRTKHVEVDRHFIKEKLDGQIILFPFVPTEEQLADILTKALSTKAFYDSLDKLGI 1173

Query: 25   CDIHSP 8
            CD+++P
Sbjct: 1174 CDLYAP 1179


>emb|CAN64580.1| hypothetical protein VITISV_002159 [Vitis vinifera]
          Length = 1453

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/66 (54%), Positives = 48/66 (72%)
 Frame = -3

Query: 205  NPVQHDRTRHIEVDRYFLRDKVTSGKICVLYVPTSQ*LANFLTKALSSRLFLEILPTLGM 26
            NPVQHDRT+HIE+DR+F+++K+ SG IC  YV T   LA+ LTK LSS +F   +  LGM
Sbjct: 1387 NPVQHDRTKHIEIDRHFIKEKLDSGLICTPYVSTHGQLADILTKGLSSSVFQSFVSKLGM 1446

Query: 25   CDIHSP 8
             + +SP
Sbjct: 1447 VNTYSP 1452


>emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]
          Length = 626

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = -3

Query: 205 NPVQHDRTRHIEVDRYFLRDKVTSGKICVLYVPTSQ*LANFLTKALSSRLFLEILPTLGM 26
           NPVQHDRT+HIE+DR+F+++K+ +G IC  YV T+  LA+ LTK LSS +F   +  LGM
Sbjct: 560 NPVQHDRTKHIEIDRHFIKEKLDNGLICTPYVSTNGQLADILTKGLSSSVFQSFVSKLGM 619

Query: 25  CDIHSP 8
            + +SP
Sbjct: 620 VNTYSP 625


>emb|CAN73022.1| hypothetical protein VITISV_004050 [Vitis vinifera]
          Length = 767

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/65 (50%), Positives = 50/65 (76%)
 Frame = -3

Query: 205 NPVQHDRTRHIEVDRYFLRDKVTSGKICVLYVPTSQ*LANFLTKALSSRLFLEILPTLGM 26
           NP+QHDRT+HIE+DR+F+++K+  G +C+ YVP    LA+ LTK L+S +F +++  LGM
Sbjct: 701 NPIQHDRTKHIEIDRHFIKEKLEEGVVCMSYVPLEHQLADILTKGLNSSMFHDLVFKLGM 760

Query: 25  CDIHS 11
            DI+S
Sbjct: 761 EDIYS 765


>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
          Length = 621

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/66 (54%), Positives = 47/66 (71%)
 Frame = -3

Query: 205 NPVQHDRTRHIEVDRYFLRDKVTSGKICVLYVPTSQ*LANFLTKALSSRLFLEILPTLGM 26
           NPVQHDRT+HIE+DR+F+++K+ SG IC  YV T   LA+ LTK LSS  F   +  LGM
Sbjct: 555 NPVQHDRTKHIEIDRHFIKEKLDSGLICTPYVSTHGQLADILTKGLSSSXFQSFVSKLGM 614

Query: 25  CDIHSP 8
            + +SP
Sbjct: 615 VNTYSP 620


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