BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037328
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatul...    59   5e-07
ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatul...    59   5e-07
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|AFK38351.1| unknown [Medicago truncatula]                           56   3e-06

>ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|222848565|gb|EEE86112.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = +2

Query: 2   INTWIFFAIMHNVQELCLNIESGTVEK--LIDCFYSCCSLTVLTLYQLV-LRLPEVIHFP 172
           INTWIF A+    QEL L++      +  L  C ++  SLTVL LY    L+L   I  P
Sbjct: 86  INTWIFAALCCKFQELKLDLYQYNANESLLPHCLFTFQSLTVLELYLFHDLKLLSTICLP 145

Query: 173 NLHKMYLSFVEFHGKNSTQIFFSSFPVLKELILQSCTFHDLNALTISPPKL 325
           NL ++ LSF+ F   +STQ+F      L+++ L  CT+ D   + IS P L
Sbjct: 146 NLKELKLSFITFVDDHSTQLFDGCLN-LRKVTLDECTWKDEKFVFISSPML 195


>ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486807|gb|AES68010.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 466

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
 Frame = +2

Query: 14  IFFAIMHNVQELCLNIESGTVEKLIDCFYSCCSLTVLTL--YQLVLR----LPEVIHFPN 175
           I +AI HNVQ L +N     ++    CF+SC +LT L L  Y ++       P+ ++ P 
Sbjct: 171 IKYAISHNVQHLLMNFPC-RIDLFPSCFFSCHTLTSLNLSGYDILFGQIPIFPKNLNLPA 229

Query: 176 LHKMYLSFVEFHGKNSTQIF--FSSFPVLKELILQSCTFHDLNALTISPPKLTDL 334
           L  + L +  FH  ++  +   FS+F +L  LI+ SC   D   L IS  KL +L
Sbjct: 230 LTSLSLKYFSFHRSDAGCVVEPFSTFNMLNRLIIDSCIVQDAQNLCISSTKLVNL 284


>ref|XP_003597758.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486806|gb|AES68009.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
 Frame = +2

Query: 14  IFFAIMHNVQELCLNIESGTVEKLIDCFYSCCSLTVLTL--YQLVLR----LPEVIHFPN 175
           I +AI HNVQ L +N     ++    CF+SC +LT L L  Y ++       P+ ++ P 
Sbjct: 172 IKYAISHNVQHLLMNFPC-RIDLFPSCFFSCHTLTSLNLSGYDILFGQIPIFPKNLNLPA 230

Query: 176 LHKMYLSFVEFHGKNSTQIF--FSSFPVLKELILQSCTFHDLNALTISPPKLTDL 334
           L  + L +  FH  ++  +   FS+F +L  LI+ SC   D   L IS  KL +L
Sbjct: 231 LTSLSLKYFSFHRSDAGCVVEPFSTFNMLNRLIIDSCIVQDAQNLCISSTKLVNL 285


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = +2

Query: 8   TWIFFAIMHNVQELCLNI-ESGTVEKLID--CFYSCCSLTVLTLYQL-VLRLPEVIHFPN 175
           TW+  A+  NV+ELC+N  E G  E  +   C ++C +LT L +    VLRL   I  P 
Sbjct: 127 TWVSAAVNRNVKELCVNFYEGGESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPC 186

Query: 176 LHKMYLSFVEFHGKNSTQIFFSSFPVLKELILQSCTFHDLNALTISPPKLTDL 334
           L  + L  V F  ++STQ    +   L++L +    + +L A+TIS PKL  L
Sbjct: 187 LKILSLQHVVFPDEDSTQQIL-NLRTLEKLKISYYDWKNLKAITISAPKLRSL 238


>gb|AFK38351.1| unknown [Medicago truncatula]
          Length = 430

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
 Frame = +2

Query: 14  IFFAIMHNVQELCLNIESGTVEKLIDCFYSCCSLTVLTL--YQLVLR----LPEVIHFPN 175
           I +AI HNVQ L +N     ++    CF+SC +LT L L  Y ++       P+ ++ P 
Sbjct: 171 IKYAISHNVQHLLMNFPC-RIDLFPSCFFSCHTLTSLNLSGYDILFGQIPIFPKNLNLPA 229

Query: 176 LHKMYLSFVEFHGKNSTQIF--FSSFPVLKELILQSCTFHDLNALTISPPKLTDL 334
           L  + L +   H  ++  +   FS+F +L  LI+ SC   D   L IS  KL +L
Sbjct: 230 LTSLSLKYFSLHRSDAGCVVEPFSTFNMLNRLIIDSCIVQDAQNLCISSTKLVNL 284