BLASTX nr result

ID: Coptis25_contig00037325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037325
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sag...   231   2e-58
ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240...   189   7e-46
emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]   189   7e-46
ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247...   174   2e-41
ref|XP_002302702.1| predicted protein [Populus trichocarpa] gi|2...   150   3e-34

>gb|AFH03054.1| R2R3-MYB transcription factor MYB2 [Epimedium sagittatum]
          Length = 440

 Score =  231 bits (588), Expect = 2e-58
 Identities = 135/270 (50%), Positives = 166/270 (61%), Gaps = 6/270 (2%)
 Frame = -2

Query: 836 FTIDGYSSTKMXXXXXXSATVTPT-KDFFLDRFINSHRGSTTTGKPSDSMEYFPLQQLNY 660
           F+++G S++K         TV PT KDFFLDRFI +H  S+T+ +PSDS+EYFPLQQL+Y
Sbjct: 176 FSVEGPSNSKFSNTNSI--TVNPTTKDFFLDRFIATHNTSSTSCRPSDSLEYFPLQQLSY 233

Query: 659 GSNA---ASQNTSLWYNQSCRPFEMNNEFXXXXXXXXXXXXXXXXXXXXLGPKSSIGLXX 489
           GSNA   A+ N  LW+NQ+C+PFEMN EF                    +G KSS+ L  
Sbjct: 234 GSNAGLSATHNPVLWFNQNCKPFEMNTEFNSNSTSSVLPSVSTTILPTTMGFKSSLSLPS 293

Query: 488 XXXXXXXXXXXXGQYWEAXXXXXXXXXXXXXXXGIELQSNPSFFENSVFSWGLTDCNVAD 309
                       GQ+WEA                IELQS+ S FEN+VFSWG  DC+V D
Sbjct: 294 DNPPPTTFNMSGGQFWEAGNASNTSRSNSGSSSSIELQSSNSMFENNVFSWGSADCSVPD 353

Query: 308 KESRIYSIEGEPDDIKWSEYCPTPFLMAATTQSQSPHPS-ICNEIKSEAQFTIDGSSTTW 132
           KE++I+  E EP+DIKWSEY    FLMAA T SQSP P  + NEIKSE QFT + ++T W
Sbjct: 354 KEAQIHPPEAEPEDIKWSEYLQNTFLMAAAT-SQSPTPQPLYNEIKSENQFTSNETTTPW 412

Query: 131 HESQQHQQLQTSDIYAKDFQRI-AAAFGQL 45
           H  QQ QQLQ SD+Y KDFQR  AAAFGQ+
Sbjct: 413 H--QQQQQLQASDMYVKDFQRFAAAAFGQI 440


>ref|XP_002276091.1| PREDICTED: uncharacterized protein LOC100240910 [Vitis vinifera]
          Length = 439

 Score =  189 bits (480), Expect = 7e-46
 Identities = 105/246 (42%), Positives = 136/246 (55%), Gaps = 4/246 (1%)
 Frame = -2

Query: 770 PTKDFFLDRFINSHRGSTTTGKPSDSMEYFPLQQLNYGSN---AASQNTSLWYNQSCRPF 600
           PT++FFLDRF+ SH  STT+ +PS  + +F  QQLNYG N   + + N +L +N + R  
Sbjct: 194 PTQEFFLDRFVTSHESSTTSCRPSGLVGHFSFQQLNYGPNIGLSVNPNATLSFNPNSRSP 253

Query: 599 EMNNEFXXXXXXXXXXXXXXXXXXXXLGPKSSIGLXXXXXXXXXXXXXXGQYWEAXXXXX 420
           E+ +EF                       K SI L               Q WE      
Sbjct: 254 EIISEFSSSMTPTILPSMLSTILPTPTSIKPSISLPSSNPSIGSFDVNGVQNWEVGTFSN 313

Query: 419 XXXXXXXXXXGIELQSNPSFFENSVFSWGLTDCNVADKESRIYSIEGEPDDIKWSEYCPT 240
                      IELQSN +FFEN+ FS GL DC  +DKE++I+ +EG+P+DIKWSEY  T
Sbjct: 314 NASSSNGSRNSIELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWSEYLHT 373

Query: 239 PFLMAATTQSQSPHPSICNEIKSEAQFTIDGSSTTWHESQQHQQLQTS-DIYAKDFQRIA 63
           PFL+  T Q+QSP P I +E K    FT DGSST WH++QQ Q +Q S DIY KD QR+ 
Sbjct: 374 PFLLGTTLQNQSPQP-IYSETKPGIHFTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLG 432

Query: 62  AAFGQL 45
            AFGQ+
Sbjct: 433 VAFGQI 438


>emb|CAN62191.1| hypothetical protein VITISV_020114 [Vitis vinifera]
          Length = 439

 Score =  189 bits (480), Expect = 7e-46
 Identities = 105/246 (42%), Positives = 136/246 (55%), Gaps = 4/246 (1%)
 Frame = -2

Query: 770 PTKDFFLDRFINSHRGSTTTGKPSDSMEYFPLQQLNYGSN---AASQNTSLWYNQSCRPF 600
           PT++FFLDRF+ SH  STT+ +PS  + +F  QQLNYG N   + + N +L +N + R  
Sbjct: 194 PTQEFFLDRFVTSHESSTTSCRPSGLVGHFSFQQLNYGPNIGLSVNPNATLSFNPNSRSP 253

Query: 599 EMNNEFXXXXXXXXXXXXXXXXXXXXLGPKSSIGLXXXXXXXXXXXXXXGQYWEAXXXXX 420
           E+ +EF                       K SI L               Q WE      
Sbjct: 254 EIISEFSSSMTPTILPSMLSTILPTPTSIKPSISLPSSNPSIGSFDVNGVQNWEVGTFSN 313

Query: 419 XXXXXXXXXXGIELQSNPSFFENSVFSWGLTDCNVADKESRIYSIEGEPDDIKWSEYCPT 240
                      IELQSN +FFEN+ FS GL DC  +DKE++I+ +EG+P+DIKWSEY  T
Sbjct: 314 NASSSNGSRNSIELQSNSAFFENNFFSLGLADCGKSDKENQIHMLEGDPEDIKWSEYLHT 373

Query: 239 PFLMAATTQSQSPHPSICNEIKSEAQFTIDGSSTTWHESQQHQQLQTS-DIYAKDFQRIA 63
           PFL+  T Q+QSP P I +E K    FT DGSST WH++QQ Q +Q S DIY KD QR+ 
Sbjct: 374 PFLLGTTLQNQSPQP-IYSETKPGIHFTTDGSSTGWHQNQQEQPIQASADIYTKDLQRLG 432

Query: 62  AAFGQL 45
            AFGQ+
Sbjct: 433 VAFGQI 438


>ref|XP_002281027.1| PREDICTED: uncharacterized protein LOC100247039 [Vitis vinifera]
          Length = 451

 Score =  174 bits (442), Expect = 2e-41
 Identities = 99/246 (40%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
 Frame = -2

Query: 773 TPTKDFFLDRFINSHRGSTTTGKPSDSMEYFPLQQLNYGSNAA---SQNTSLWYNQSCRP 603
           TP KDFFLDRF+ SH+ ++T  +PSD + Y   QQLNY SNA    +    LW++QS + 
Sbjct: 211 TPNKDFFLDRFMISHQENSTGCQPSDVVGYLAPQQLNYPSNARLSINPTQPLWFSQSSKT 270

Query: 602 FEMNNEFXXXXXXXXXXXXXXXXXXXXLGPKSSIGLXXXXXXXXXXXXXXGQYWEAXXXX 423
            +MN+EF                    +  K SI                 ++W+A    
Sbjct: 271 LDMNSEFSSNAVSSVLSSVTSSLLPSPMPYKPSIPFHSDNPSIPSFTLSGSRFWDAGAST 330

Query: 422 XXXXXXXXXXXGIELQSNPSFFENSVFSWGLTDCNVADKESRIYSIEGEPDDIKWSEYCP 243
                        ELQSN SFFENS+F WGL DC+ +DK ++I+ IE EP+DIKW EY  
Sbjct: 331 NSSNSSSGSSSSAELQSNSSFFENSIFPWGLADCSTSDKGAQIHIIESEPEDIKWPEYLQ 390

Query: 242 TPFLMAATTQSQSPHPSICNEIKSEAQFTIDGSSTTWHESQQHQQLQTSDIYAKDFQRIA 63
            PFLMAA  Q+Q+P P + NEIKSE  F  + SS  W  SQQ Q+     + A D QR+ 
Sbjct: 391 NPFLMAAALQNQTPQP-LYNEIKSETHFITETSSAMWAHSQQQQE----HLQAPDIQRLP 445

Query: 62  AAFGQL 45
           A FG +
Sbjct: 446 ATFGHI 451


>ref|XP_002302702.1| predicted protein [Populus trichocarpa] gi|222844428|gb|EEE81975.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  150 bits (380), Expect = 3e-34
 Identities = 95/249 (38%), Positives = 125/249 (50%), Gaps = 6/249 (2%)
 Frame = -2

Query: 779 TVTPTKDFFLDRFINS-HRGSTTTGKPSDSMEYFPLQQLNYGSNA---ASQNTSLWYNQS 612
           T T  KDFF DRF    H GST+   PS  + +FPLQQLNY SNA    +   SLW +Q+
Sbjct: 215 TPTSNKDFFFDRFTAFLHEGSTSNCPPSGFVGHFPLQQLNYASNARLATNSIPSLWLSQT 274

Query: 611 CRPFEMNNEFXXXXXXXXXXXXXXXXXXXXL-GPKSSIGLXXXXXXXXXXXXXXGQYWEA 435
            + F MN EF                      G K SI +               + WE 
Sbjct: 275 SKAFGMNCEFSSTMIPSIPPPAVTSSFLSSSMGYKPSITVPPDNPSLPSFTTNSYRPWET 334

Query: 434 XXXXXXXXXXXXXXXGIELQSNPSFFENSVFSWGLTDCNVADKESRIYSIEGEPDDIKWS 255
                            ELQSN SFFEN++FSWGL DC+  +KE++ + I  + +DI+W 
Sbjct: 335 GAPSNNSNSSTGSNGSTELQSNSSFFENTIFSWGLGDCSSTEKEAQNHLIGSQQEDIRWP 394

Query: 254 EYCPTPFLMAATTQSQSPHPSICNEIKSEAQFTIDGSSTTWHESQQHQQ-LQTSDIYAKD 78
           EY   P LMAA+ Q+Q+   S+ NEIK+E     +  S  W ++QQ Q+ LQ  DI  KD
Sbjct: 395 EYLQNPLLMAASLQNQN-QQSLYNEIKTETHLLTENPSGMWPDNQQEQEPLQNPDICPKD 453

Query: 77  FQRIAAAFG 51
            QRI A++G
Sbjct: 454 MQRITASYG 462


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