BLASTX nr result

ID: Coptis25_contig00037299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037299
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...   128   4e-28
ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...   122   4e-26
emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   120   9e-26
ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   120   1e-25
emb|CBI28424.3| unnamed protein product [Vitis vinifera]              120   1e-25

>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1234

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/99 (62%), Positives = 74/99 (74%)
 Frame = -3

Query: 299  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 120
            S+L+ CFQ+  GSG + ++N+ KP  L+ LL GKQIL          VAEGAL K+GA V
Sbjct: 1063 SVLIACFQEAFGSGKKSEVNRKKPPALQNLLRGKQILVVDDNLVNRRVAEGALKKHGAIV 1122

Query: 119  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQ 3
            TCVESGKA++E L PPH+FDACFMD QMPEMDGFEATRQ
Sbjct: 1123 TCVESGKAALEKLKPPHSFDACFMDFQMPEMDGFEATRQ 1161


>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 922

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/99 (59%), Positives = 73/99 (73%)
 Frame = -3

Query: 299  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 120
            S+L +CFQ+ +GSG + Q+N+ KP+ L+ LL  K+IL          VAEGAL KYGA V
Sbjct: 748  SVLFSCFQEAIGSGKKSQVNRRKPSTLQNLLREKRILVVDDNKVNRRVAEGALKKYGAIV 807

Query: 119  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQ 3
            TCVESGK ++E+L PPH FDACFMD  MPE+DGFEATRQ
Sbjct: 808  TCVESGKEALELLKPPHTFDACFMDRHMPELDGFEATRQ 846


>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/99 (61%), Positives = 73/99 (73%)
 Frame = -3

Query: 299  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 120
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1137 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1196

Query: 119  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQ 3
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF+AT++
Sbjct: 1197 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFKATQE 1235


>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/99 (61%), Positives = 72/99 (72%)
 Frame = -3

Query: 299  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 120
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1098 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1157

Query: 119  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQ 3
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF AT++
Sbjct: 1158 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFRATQE 1196


>emb|CBI28424.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/99 (61%), Positives = 72/99 (72%)
 Frame = -3

Query: 299  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 120
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1029 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1088

Query: 119  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDGFEATRQ 3
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDGF AT++
Sbjct: 1089 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDGFRATQE 1127


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