BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037286
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus...   139   2e-31
ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_002331163.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003630782.1| Pentatricopeptide repeat-containing protein ...   128   4e-28
ref|XP_003630764.1| Pentatricopeptide repeat-containing protein ...   128   4e-28

>ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223546737|gb|EEF48235.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 745

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/96 (63%), Positives = 77/96 (80%)
 Frame = +2

Query: 41  SVQAGRGDKVYYLLHTLRKSIRKVSPCTADLIESWFRSTPASRVGEKEWDERLIKEAMKK 220
           SV+AG+GDKVYYLLH LR S+RKVSP TA++I  WF+S  ASRVG+ +WD+R++KEA+  
Sbjct: 340 SVEAGKGDKVYYLLHKLRTSVRKVSPSTANIIIEWFKSKAASRVGKTKWDKRVVKEAIAN 399

Query: 221 RGGGWHGQSWLGRGKWTVVRTSLRTDGVCESCGDKL 328
            GGGWHGQ WLG+GKWTV  +S+  D  C+SCG KL
Sbjct: 400 GGGGWHGQGWLGKGKWTVSCSSVGVDAFCKSCGKKL 435


>ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 724

 Score =  132 bits (331), Expect = 4e-29
 Identities = 56/92 (60%), Positives = 71/92 (77%)
 Frame = +2

Query: 41  SVQAGRGDKVYYLLHTLRKSIRKVSPCTADLIESWFRSTPASRVGEKEWDERLIKEAMKK 220
           SV AG  DKVYY+LH LR  +RKVSP T+ LI  WF+S  ASRVG+++WDERLI+EA++ 
Sbjct: 318 SVGAGNSDKVYYVLHKLRSIVRKVSPTTSSLIVDWFKSKQASRVGKRKWDERLIREAIEN 377

Query: 221 RGGGWHGQSWLGRGKWTVVRTSLRTDGVCESC 316
            GGGWHGQ WLG+GKW  V T++  DG+C+ C
Sbjct: 378 NGGGWHGQGWLGKGKWEAVHTTIGKDGMCKCC 409


>ref|XP_002331163.1| predicted protein [Populus trichocarpa] gi|222873246|gb|EEF10377.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/96 (60%), Positives = 73/96 (76%)
 Frame = +2

Query: 41  SVQAGRGDKVYYLLHTLRKSIRKVSPCTADLIESWFRSTPASRVGEKEWDERLIKEAMKK 220
           SV+ G+GDKVYYLLH LR+ +R+VSP TA +I  WF S  ASRVG+ +WD   +KEA++ 
Sbjct: 170 SVEGGKGDKVYYLLHKLRRIVRRVSPSTAGIIVRWFNSKAASRVGKTKWD---VKEAIEN 226

Query: 221 RGGGWHGQSWLGRGKWTVVRTSLRTDGVCESCGDKL 328
            GGGWHGQ WLG+GKWTV  TS+  DG+C+ CG KL
Sbjct: 227 GGGGWHGQGWLGKGKWTVSCTSVGLDGICKYCGQKL 262


>ref|XP_003630782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524804|gb|AET05258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  128 bits (322), Expect = 4e-28
 Identities = 54/96 (56%), Positives = 74/96 (77%)
 Frame = +2

Query: 41  SVQAGRGDKVYYLLHTLRKSIRKVSPCTADLIESWFRSTPASRVGEKEWDERLIKEAMKK 220
           S++ G+ D+VYY+LH LR S+RKVS  TADLI  WF+S  A +VG+++WD  LI +AM+ 
Sbjct: 295 SIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQN 354

Query: 221 RGGGWHGQSWLGRGKWTVVRTSLRTDGVCESCGDKL 328
            GGGWHG  WLG+GKW V++TS+R DG+C+ CG +L
Sbjct: 355 NGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQL 390


>ref|XP_003630764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524786|gb|AET05240.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  128 bits (322), Expect = 4e-28
 Identities = 54/96 (56%), Positives = 74/96 (77%)
 Frame = +2

Query: 41  SVQAGRGDKVYYLLHTLRKSIRKVSPCTADLIESWFRSTPASRVGEKEWDERLIKEAMKK 220
           S++ G+ D+VYY+LH LR S+RKVS  TADLI  WF+S  A +VG+++WD  LI +AM+ 
Sbjct: 329 SIRGGKSDRVYYVLHKLRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQN 388

Query: 221 RGGGWHGQSWLGRGKWTVVRTSLRTDGVCESCGDKL 328
            GGGWHG  WLG+GKW V++TS+R DG+C+ CG +L
Sbjct: 389 NGGGWHGTGWLGKGKWQVLQTSVRKDGMCKCCGVQL 424