BLASTX nr result

ID: Coptis25_contig00037284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037284
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW81499.1| hypothetical protein ZEAMMB73_478263 [Zea mays]        136   2e-30
ref|XP_002440965.1| hypothetical protein SORBIDRAFT_09g017920 [S...   136   2e-30
dbj|BAD45458.1| pectin methylesterase PME1-like protein [Oryza s...   134   1e-29
ref|NP_001042865.1| Os01g0311800 [Oryza sativa Japonica Group] g...   134   1e-29
gb|AFK47957.1| unknown [Lotus japonicus]                              134   1e-29

>gb|AFW81499.1| hypothetical protein ZEAMMB73_478263 [Zea mays]
          Length = 574

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/143 (49%), Positives = 97/143 (67%)
 Frame = +1

Query: 40  SLIFILFFSTSLADIVPSTTPLPPENACNTSLDPKYCKSVLPTTGGRQNIYGYCRSSLGQ 219
           +L+ + F   +L+D  PST P+ P  ACN + DP +C+SVLP  G + ++Y Y R S+ +
Sbjct: 14  ALLMLSFSGLTLSDTTPST-PVSPSAACNATTDPTFCRSVLPPRG-KGDLYKYGRFSVAE 71

Query: 220 SLWSAKKFAALIDQYLKGSATLTKSAIQALEDCQLLAGLNVDFLQSTSGTINMTQTLQNM 399
           SL  A+ FAAL+D+YL     L+ SAI AL DCQL+A LNVDFL +   TI  T TL + 
Sbjct: 72  SLAGARMFAALVDRYLARHRHLSSSAIGALRDCQLMADLNVDFLTAAGATIKTTDTLLDP 131

Query: 400 QTDYLHSLLSAVVTNQQTCLEGL 468
           Q D +H+LLSA++TNQQTC +GL
Sbjct: 132 QADDVHTLLSAILTNQQTCFDGL 154


>ref|XP_002440965.1| hypothetical protein SORBIDRAFT_09g017920 [Sorghum bicolor]
           gi|241946250|gb|EES19395.1| hypothetical protein
           SORBIDRAFT_09g017920 [Sorghum bicolor]
          Length = 573

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/143 (49%), Positives = 98/143 (68%)
 Frame = +1

Query: 40  SLIFILFFSTSLADIVPSTTPLPPENACNTSLDPKYCKSVLPTTGGRQNIYGYCRSSLGQ 219
           +L+ + F   +L+D  PST P+ P  ACN + DP +C+SVLP  G + ++Y Y R S+ +
Sbjct: 11  ALLLLSFSGLTLSDETPST-PVSPSAACNATTDPTFCRSVLPPRG-KGDLYTYGRFSVAE 68

Query: 220 SLWSAKKFAALIDQYLKGSATLTKSAIQALEDCQLLAGLNVDFLQSTSGTINMTQTLQNM 399
           SL  A+KFAA++D+YL     L+ SAI AL DCQL+A LNVDFL +   TI  T TL + 
Sbjct: 69  SLAGARKFAAVVDRYLARHRHLSSSAIGALRDCQLMAELNVDFLTAAGATIKSTDTLLDP 128

Query: 400 QTDYLHSLLSAVVTNQQTCLEGL 468
           Q D +H+LLSA++TNQQTC +GL
Sbjct: 129 QADDVHTLLSAILTNQQTCFDGL 151


>dbj|BAD45458.1| pectin methylesterase PME1-like protein [Oryza sativa Japonica
           Group]
          Length = 336

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/157 (45%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
 Frame = +1

Query: 4   MTSTHFASLYTISLIF-ILFFSTSLADIVPSTTPLPPENACNTSLDPKYCKSVLPTTGGR 180
           M S H A+  + +L+  +L    S A + P  TP+PP  ACN + DP +C+SVLP + G 
Sbjct: 1   MASFHIATALSATLLLSLLVLGRSDATLPPPATPVPPSTACNGTTDPTFCRSVLP-SNGT 59

Query: 181 QNIYGYCRSSLGQSLWSAKKFAALIDQYLKGSATLTKSAIQALEDCQLLAGLNVDFLQST 360
            N+Y Y R S+ +SL +A KF +L+++YL G   L   A+ AL+DCQLL+GLN+DFL + 
Sbjct: 60  SNLYTYGRFSVAKSLANANKFLSLVNRYLSG-GRLAAGAVAALQDCQLLSGLNIDFLSAA 118

Query: 361 SGTINMT-QTLQNMQTDYLHSLLSAVVTNQQTCLEGL 468
             T+N T  TL + Q + + +LLSA++TNQQTC +GL
Sbjct: 119 GATLNRTSSTLLDPQAEDVQTLLSAILTNQQTCADGL 155


>ref|NP_001042865.1| Os01g0311800 [Oryza sativa Japonica Group]
           gi|20805092|dbj|BAB92764.1| putative pectinesterase
           [Oryza sativa Japonica Group]
           gi|113532396|dbj|BAF04779.1| Os01g0311800 [Oryza sativa
           Japonica Group] gi|215741416|dbj|BAG97911.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 557

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/157 (45%), Positives = 103/157 (65%), Gaps = 2/157 (1%)
 Frame = +1

Query: 4   MTSTHFASLYTISLIF-ILFFSTSLADIVPSTTPLPPENACNTSLDPKYCKSVLPTTGGR 180
           M S H A+  + +L+  +L    S A + P  TP+PP  ACN + DP +C+SVLP + G 
Sbjct: 1   MASFHIATALSATLLLSLLVLGRSDATLPPPATPVPPSTACNGTTDPTFCRSVLP-SNGT 59

Query: 181 QNIYGYCRSSLGQSLWSAKKFAALIDQYLKGSATLTKSAIQALEDCQLLAGLNVDFLQST 360
            N+Y Y R S+ +SL +A KF +L+++YL G   L   A+ AL+DCQLL+GLN+DFL + 
Sbjct: 60  SNLYTYGRFSVAKSLANANKFLSLVNRYLSG-GRLAAGAVAALQDCQLLSGLNIDFLSAA 118

Query: 361 SGTINMT-QTLQNMQTDYLHSLLSAVVTNQQTCLEGL 468
             T+N T  TL + Q + + +LLSA++TNQQTC +GL
Sbjct: 119 GATLNRTSSTLLDPQAEDVQTLLSAILTNQQTCADGL 155


>gb|AFK47957.1| unknown [Lotus japonicus]
          Length = 256

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/153 (46%), Positives = 104/153 (67%), Gaps = 4/153 (2%)
 Frame = +1

Query: 22  ASLYTISLIFIL---FFSTSLADIVPSTTPLPPENACNTSLDPKYCKSVLPTTGGRQNIY 192
           ++L  I L F++   FF++      P TTP+ P  AC ++ DP YCKSVLPT  G  N+Y
Sbjct: 5   STLCNIPLTFLIPLPFFASIAFSDTPPTTPVSPGTACKSTPDPSYCKSVLPTQNG--NVY 62

Query: 193 GYCRSSLGQSLWSAKKFAALIDQYLKGSATLTKSAIQALEDCQLLAGLNVDFLQSTSGTI 372
            Y R S+ +SL  A+KF  L+D+YL   +TL+ +A++AL+DC+ L  LN+DFL S+  T+
Sbjct: 63  DYGRFSVKKSLSQARKFLNLVDKYLHRGSTLSATAVRALQDCRTLGELNLDFLSSSFQTV 122

Query: 373 NMT-QTLQNMQTDYLHSLLSAVVTNQQTCLEGL 468
           N T + L ++Q D + +LLSA++TNQQTCL+GL
Sbjct: 123 NKTARFLPSLQADDIQTLLSAILTNQQTCLDGL 155


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