BLASTX nr result

ID: Coptis25_contig00037278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037278
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]   138   5e-31
emb|CAN66238.1| hypothetical protein VITISV_041838 [Vitis vinifera]   137   7e-31
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...   136   2e-30
emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]   136   2e-30
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   136   2e-30

>emb|CAN62151.1| hypothetical protein VITISV_032403 [Vitis vinifera]
          Length = 835

 Score =  138 bits (347), Expect = 5e-31
 Identities = 61/93 (65%), Positives = 79/93 (84%)
 Frame = -2

Query: 279 DEVDKLKQVGFIRKVDYQEWIANIVAVPKKNGTVRLCVDFTNVNQATPKDSFPLPRIDRL 100
           DE++K  +VGFIR+V+Y EW+AN V VPKK G  R+CVD+TN+N A  KDSFPLPRID++
Sbjct: 39  DEMEKFLEVGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRIDQI 98

Query: 99  VDQTCGHELLSFMDAYSGYNQIPLAEEDQEKTS 1
           VD T GHE+LSF+DA+SGY+QIP+A ED+EKT+
Sbjct: 99  VDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTT 131


>emb|CAN66238.1| hypothetical protein VITISV_041838 [Vitis vinifera]
          Length = 225

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/93 (64%), Positives = 79/93 (84%)
 Frame = -2

Query: 279 DEVDKLKQVGFIRKVDYQEWIANIVAVPKKNGTVRLCVDFTNVNQATPKDSFPLPRIDRL 100
           DE+DKL +VGFIR+VDY +W+AN+V VPKK G  R+CVD+TN+N A PKDSFPLPRID++
Sbjct: 39  DEIDKLLEVGFIREVDYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQI 98

Query: 99  VDQTCGHELLSFMDAYSGYNQIPLAEEDQEKTS 1
           VD T G  +LSF+DA+SGY+QIP++  D+EKT+
Sbjct: 99  VDSTAGQGMLSFLDAFSGYHQIPMSLADEEKTA 131


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/93 (64%), Positives = 78/93 (83%)
 Frame = -2

Query: 279 DEVDKLKQVGFIRKVDYQEWIANIVAVPKKNGTVRLCVDFTNVNQATPKDSFPLPRIDRL 100
           DE++K  + GFIR+V+Y EW+AN V VPKK G  R+CVD+TN+N A  KDSFPLPRID++
Sbjct: 607 DEMEKFLEAGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRIDQI 666

Query: 99  VDQTCGHELLSFMDAYSGYNQIPLAEEDQEKTS 1
           VD T GHE+LSF+DA+SGY+QIP+A ED+EKT+
Sbjct: 667 VDATAGHEVLSFLDAFSGYHQIPMAPEDEEKTT 699


>emb|CAN82687.1| hypothetical protein VITISV_006267 [Vitis vinifera]
          Length = 969

 Score =  136 bits (342), Expect = 2e-30
 Identities = 59/93 (63%), Positives = 79/93 (84%)
 Frame = -2

Query: 279 DEVDKLKQVGFIRKVDYQEWIANIVAVPKKNGTVRLCVDFTNVNQATPKDSFPLPRIDRL 100
           DE++KL +VGFIR+V Y EW+AN+V VPKK G  R+CVD+TN+N A PKDSFPLPRID++
Sbjct: 39  DEINKLLEVGFIREVSYPEWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQI 98

Query: 99  VDQTCGHELLSFMDAYSGYNQIPLAEEDQEKTS 1
           VD T G  +LSF+DA+SGY+QIP++ +D+EKT+
Sbjct: 99  VDSTSGQGMLSFLDAFSGYHQIPMSPDDEEKTA 131


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/93 (67%), Positives = 77/93 (82%)
 Frame = -2

Query: 282 NDEVDKLKQVGFIRKVDYQEWIANIVAVPKKNGTVRLCVDFTNVNQATPKDSFPLPRIDR 103
           NDEVDKL ++G IR+V Y +W+AN V V KKNG  R+C+DFT++N+A PKDSFPLP IDR
Sbjct: 481 NDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDR 540

Query: 102 LVDQTCGHELLSFMDAYSGYNQIPLAEEDQEKT 4
           LV+ T G+ELLSFMDA+SGYNQI +  EDQEKT
Sbjct: 541 LVESTAGNELLSFMDAFSGYNQIMMNPEDQEKT 573


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