BLASTX nr result

ID: Coptis25_contig00037277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037277
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|2...   147   8e-34
ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein...   137   1e-30
ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...   135   6e-30
ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein...   134   7e-30
ref|XP_003635081.1| PREDICTED: uncharacterized protein LOC100852...   129   3e-28

>ref|XP_002326854.1| predicted protein [Populus trichocarpa] gi|222835169|gb|EEE73604.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  147 bits (372), Expect = 8e-34
 Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
 Frame = -1

Query: 555 VHLACLEGHIKMVREILEFDHELGLIKGREWRTPLHCAVINGRVDVVGELLLACSPDCLR 376
           VH+A   GH+++VRE+L   +++ L+KG++ +TPLH A + GRVD+V EL+ AC P  ++
Sbjct: 74  VHIASSNGHVELVRELLRVGYDICLLKGKDGKTPLHLAAMKGRVDIVKELVCAC-PQSVK 132

Query: 375 ALTVRKETVLHLALKYDQIEVFEVLVKRFRAENGEEIVNWEDNEGNTILHLATYRKQFQI 196
            +T+  ETVLH+A+K +Q E  +VL++  +  +  EIVNW+D +GNTI+HLAT RKQ + 
Sbjct: 133 EVTICGETVLHVAVKSNQAEAVKVLLEEIKKLDMMEIVNWKDKDGNTIMHLATLRKQHET 192

Query: 195 IELLLKSNDFCEVVDIDMTNTSGLTALDVLR--QHSINEHNNVEIENLLQRVGAAGAHD 25
           I LL+        V+++  N SG TA DVL     S  E+N++ I  + Q+ GA  A D
Sbjct: 193 IRLLIGREAIAYGVEVNSINASGFTAKDVLDFILQSGGEYNDISILEMFQQAGAMKAMD 251


>ref|XP_002274771.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 462

 Score =  137 bits (344), Expect = 1e-30
 Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 3/184 (1%)
 Frame = -1

Query: 555 VHLACLEGHIKMVREILEFDHELGLIKGREWRTPLHCAVINGRVDVVGELLLACSPDCLR 376
           +HLA   G + +VRE+L   HELG ++  + RTPLH A I GR +V+ ELL  C P  + 
Sbjct: 75  IHLASANGFVDIVRELLMVKHELGHLRCSDSRTPLHLAAITGRTEVIRELLRIC-PASIE 133

Query: 375 ALTVRKETVLHLALKYDQIEVFEVLVKRFRAENGEEIVNWEDNEGNTILHLATYRKQFQI 196
            +TV  ET +HLA+K +Q++  + LV+ F+  N ++++N +D +GNT+LHLAT RKQ   
Sbjct: 134 DVTVGGETAVHLAVKNNQLKALKALVESFKHSNIQDLLNAKDEDGNTVLHLATARKQGLT 193

Query: 195 IELLLKSNDF-CEVVDIDMTNTSGLTALDVLR--QHSINEHNNVEIENLLQRVGAAGAHD 25
           ++LLL   D     VD+++TN SG T LD+L   Q  +NE  +  + +LL R GA  A +
Sbjct: 194 MKLLLGDGDMAAAAVDVNLTNKSGFTVLDLLDVVQQIVNEPGDYILRDLLLRSGALRASE 253

Query: 24  TVIS 13
            + S
Sbjct: 254 LIKS 257


>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score =  135 bits (339), Expect = 6e-30
 Identities = 77/178 (43%), Positives = 113/178 (63%), Gaps = 1/178 (0%)
 Frame = -1

Query: 555 VHLACLEGHIKMVREILEFDHELGLIKGREWRTPLHCAVINGRVDVVGELLLACSPDCLR 376
           +H+A   GH ++V E+L+FD +   ++GR+ +TPLHCA + G+V+VV  +L AC  +C+ 
Sbjct: 74  IHMAAANGHQEVVMELLKFDWKXCHLEGRDEKTPLHCAAMKGKVNVVRVILSACK-ECIE 132

Query: 375 ALTVRKETVLHLALKYDQIEVFEVLVKRFRAENGEEIVNWEDNEGNTILHLATYRKQFQI 196
            +TV+KE  LHLA+K  Q E   VLV++ R    E+++N +D  GNTILHLAT+RKQ Q 
Sbjct: 133 DVTVQKEIALHLAVKNSQYEAVRVLVEKVREMRREDVLNMKDEHGNTILHLATWRKQRQA 192

Query: 195 IELLLKSN-DFCEVVDIDMTNTSGLTALDVLRQHSINEHNNVEIENLLQRVGAAGAHD 25
             LL  +      V ++++ N SGLTALDVL     +E  + EI+ +L   GA  A D
Sbjct: 193 KFLLGDATIPGSGVTEVNLMNNSGLTALDVLLIFP-SEAGDREIKEILHSAGAKRAQD 249


>ref|XP_002269257.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 430

 Score =  134 bits (338), Expect = 7e-30
 Identities = 77/186 (41%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
 Frame = -1

Query: 555 VHLACLEGHIKMVREILEFDHELGLIKGREWRTPLHCAVINGRVDVVGELLLACSPDCLR 376
           +HLA   GH+ +V  +L   HEL  ++G+   TPLH A I GR D +  LLL+ SP C+ 
Sbjct: 77  IHLAAANGHVNVVEMLLGISHELCYLRGKGGLTPLHYASIKGRADTIS-LLLSSSPLCVV 135

Query: 375 ALTVRKETVLHLALKYDQIEVFEVLVKRFRAENGEEIVNWEDNEGNTILHLATYRKQFQI 196
             T R ET LH+A++ +Q+E   VLV+  +  N   I+NW+D EGNTILHLA  RK  Q+
Sbjct: 136 EETERGETALHIAVRNNQLEALRVLVEGLKRSNNLVIINWKDREGNTILHLAAARKNHQV 195

Query: 195 IELLLKSNDFCE-VVDIDMTNTSGLTALDVLRQHSINEHNNVEIENLLQRVGAAGAHDTV 19
           IELLL  N+    V++++ TN  GLTAL++            E E LL+    A      
Sbjct: 196 IELLLNCNNRSPGVLEVNATNKIGLTALEIFLLCPCESGGCSETERLLRSTAGAARDWAS 255

Query: 18  ISITTP 1
             I+TP
Sbjct: 256 NPISTP 261


>ref|XP_003635081.1| PREDICTED: uncharacterized protein LOC100852638 [Vitis vinifera]
          Length = 460

 Score =  129 bits (324), Expect = 3e-28
 Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
 Frame = -1

Query: 555 VHLACLEGHIKMVREILEFDHELGLIKGREWRTPLHCAVINGRVDVVGELLLACSPDCLR 376
           +HLA   GH+ +VR ++E   EL  +KGR+  TPLHCA + GR + +  LL++ SP C+ 
Sbjct: 77  IHLAAAHGHVDVVRMLIEISSELCCLKGRDGMTPLHCASVKGRAETMS-LLISASPLCVI 135

Query: 375 ALTVRKETVLHLALKYDQIEVFEVLVKRFRAENGEEIVNWEDNEGNTILHLATYRKQFQI 196
            +T R ET LH+A + +Q++   VLV+  R      ++N +D +GNT+LHLA  RK  Q 
Sbjct: 136 EVTERGETALHVAARNNQLDALRVLVEWLRRTKALVVINSKDGDGNTVLHLAAARKNHQA 195

Query: 195 IELLLKSNDFC-EVVDIDMTNTSGLTALDVLRQHSINEH-NNVEIENLLQRVGAA--GAH 28
           IELLL  +D   EV++++  N  GLTA D+L          + E E L + +GAA  G  
Sbjct: 196 IELLLSCSDGAPEVLEVNAINKRGLTAFDLLMLCPCESGIVHAEAERLFRGIGAARDGVL 255

Query: 27  DTVISITTP 1
           D + S   P
Sbjct: 256 DDINSTPRP 264


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