BLASTX nr result

ID: Coptis25_contig00037275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037275
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]      135   3e-30
gb|AGE09591.1| CEL2-like protein, partial [Eucalyptus cladocalyx]     129   2e-28
ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichoc...   128   6e-28
ref|XP_002872847.1| glycosyl hydrolase family 9 protein [Arabido...   127   1e-27
ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]
          Length = 511

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/87 (79%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 LIFLCFFTS-LFLCNAFPPHQLQHHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQR 83
           LI LCFFTS L LCNAF     QHHH H   A HNY+DALTKSILFFEGQRSG LPSNQR
Sbjct: 19  LILLCFFTSSLLLCNAF-----QHHH-HPRVARHNYRDALTKSILFFEGQRSGRLPSNQR 72

Query: 82  MTWRKNSGLSDGSAMHVDLVGGYYDAG 2
           MTWR++SGLSDG+AMHVDLVGGYYDAG
Sbjct: 73  MTWRRDSGLSDGAAMHVDLVGGYYDAG 99


>gb|AGE09591.1| CEL2-like protein, partial [Eucalyptus cladocalyx]
          Length = 129

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
 Frame = -2

Query: 289 MAFXXXXSVPLIFLCFFTSLFLCNAFPPHQLQHHHNHKGA-ASHNYKDALTKSILFFEGQ 113
           + F    ++ L+  CFF SLFLCNA+ P  L+H H H+   ASHNY+DALTKSILFFEGQ
Sbjct: 3   LVFLRSFTLLLLLSCFFASLFLCNAYYP--LRHSHQHRPRFASHNYRDALTKSILFFEGQ 60

Query: 112 RSGMLPSNQRMTWRKNSGLSDGSAMHVDLVGGYYDAG 2
           RSG LP +QR+TWR++SGLSDGSA +VDLVGGYYDAG
Sbjct: 61  RSGRLPRSQRVTWRRDSGLSDGSAANVDLVGGYYDAG 97


>ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222843213|gb|EEE80760.1| glycosyl hydrolase family 9
           [Populus trichocarpa]
          Length = 520

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/84 (71%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
 Frame = -2

Query: 247 CFFTSLFLCNAFPPHQLQ--HHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQRMTW 74
           CF TS   C+ FP H     HH  H   ASHNY+DALTKSILFFEGQRSG LPS+QRMTW
Sbjct: 16  CFATSFIACHGFPVHHNNPFHHRRHPRFASHNYRDALTKSILFFEGQRSGKLPSSQRMTW 75

Query: 73  RKNSGLSDGSAMHVDLVGGYYDAG 2
           R++SGL+DGS MHVDLVGGYYDAG
Sbjct: 76  RRDSGLTDGSTMHVDLVGGYYDAG 99


>ref|XP_002872847.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318684|gb|EFH49106.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 511

 Score =  127 bits (319), Expect = 1e-27
 Identities = 67/89 (75%), Positives = 70/89 (78%), Gaps = 4/89 (4%)
 Frame = -2

Query: 256 IFLCFFTSLFLCNAF--PPHQL--QHHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSN 89
           IFL FF   FLCN F  P   L   HHH H   A HNYKDALTKSILFFEGQRSG LPSN
Sbjct: 14  IFLSFF--FFLCNGFTYPTSSLFNTHHHRHH-VAKHNYKDALTKSILFFEGQRSGKLPSN 70

Query: 88  QRMTWRKNSGLSDGSAMHVDLVGGYYDAG 2
           QRM+WRK+SGLSDGSA+HVDLVGGYYDAG
Sbjct: 71  QRMSWRKDSGLSDGSALHVDLVGGYYDAG 99


>ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1|
           predicted protein [Populus trichocarpa]
           gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466627|gb|AEO97226.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 510

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = -2

Query: 259 LIFLCFFTSLFLCNAFPPHQLQ--HHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQ 86
           ++F CF T L +C+ FP H     HH  H   ASHNY+DALTKSILFFEGQRSG LPS+Q
Sbjct: 12  VLFSCFATFL-VCHGFPVHHNNPFHHRRHPRFASHNYRDALTKSILFFEGQRSGKLPSSQ 70

Query: 85  RMTWRKNSGLSDGSAMHVDLVGGYYDAG 2
           R+TWR++SGL+DGSAMHVDLVGGYYDAG
Sbjct: 71  RITWRRDSGLTDGSAMHVDLVGGYYDAG 98


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