BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037241
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...    62   2e-08
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid...    62   2e-08
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              59   1e-07
emb|CAN77352.1| hypothetical protein VITISV_011397 [Vitis vinifera]    58   7e-07
emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]    58   9e-07

>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 27/52 (51%), Positives = 41/52 (78%)
 Frame = -2

Query: 204 DGRPVFFISKTLTRAESRYSKMEKIALALVHAARRLKPYFQGRLVRVILSIP 49
           D RP+F++SK+ + AE+RY  MEK+ALA+V +AR+L+PYFQ   + V+ S+P
Sbjct: 812 DERPIFYVSKSFSDAETRYPMMEKLALAVVTSARKLRPYFQSHPIVVLTSLP 863



 Score = 21.2 bits (43), Expect(2) = 2e-08
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 61  TEYPLRKIFRNAQESSRLAE 2
           T  PLR I  +  +S RLA+
Sbjct: 860 TSLPLRAILHSPSQSGRLAK 879


>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1212

 Score = 62.0 bits (149), Expect(2) = 2e-08
 Identities = 27/52 (51%), Positives = 40/52 (76%)
 Frame = -2

Query: 204 DGRPVFFISKTLTRAESRYSKMEKIALALVHAARRLKPYFQGRLVRVILSIP 49
           D RP+F++SK+ +  E+RY  MEK+ALA+V AAR+L+PYFQ   + V+ S+P
Sbjct: 640 DERPIFYVSKSFSDVETRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSLP 691



 Score = 21.2 bits (43), Expect(2) = 2e-08
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 61  TEYPLRKIFRNAQESSRLAE 2
           T  PLR I  +  +S RLA+
Sbjct: 688 TSLPLRTILHSPNQSGRLAK 707


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 24/50 (48%), Positives = 41/50 (82%)
 Frame = -2

Query: 198 RPVFFISKTLTRAESRYSKMEKIALALVHAARRLKPYFQGRLVRVILSIP 49
           +P++++SK++T  E+RY+ MEK+ALA+V +AR+L+PYFQ   V+V+ + P
Sbjct: 342 KPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQP 391



 Score = 21.9 bits (45), Expect(2) = 1e-07
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 70  QSYTEYPLRKIFRNAQESSRLAE 2
           Q  T  PLR I  +  +S RLA+
Sbjct: 385 QVLTNQPLRTILHSPSQSGRLAK 407


>emb|CAN77352.1| hypothetical protein VITISV_011397 [Vitis vinifera]
          Length = 864

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -2

Query: 198 RPVFFISKTLTRAESRYSKMEKIALALVHAARRLKPYFQGRLVRVILSIPYARSFVMHRN 19
           RPV+FISK    AE+RYS+ME+ ALAL  AA++L+PYFQ   + V  + P     V+H++
Sbjct: 294 RPVYFISKAFADAETRYSRMEQTALALRTAAQKLRPYFQAHPITVFTNQPLRN--VLHKS 351

Query: 18  QV 13
            +
Sbjct: 352 DI 353


>emb|CAN69143.1| hypothetical protein VITISV_027770 [Vitis vinifera]
          Length = 622

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -2

Query: 198 RPVFFISKTLTRAESRYSKMEKIALALVHAARRLKPYFQGRLVRVILSIPYARSFVMHRN 19
           RPV+FISK L   E+RYS+ME+ ALAL  AA++L+PYFQ   + V+ + P     V+H+ 
Sbjct: 195 RPVYFISKALADTETRYSRMEQTALALRTAAQKLRPYFQAHPITVLTNQPLRN--VLHKP 252

Query: 18  QV 13
            +
Sbjct: 253 DI 254