BLASTX nr result

ID: Coptis25_contig00037235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037235
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520499.1| d-lactate dehydrogenase, putative [Ricinus c...   385   e-105
ref|XP_002529978.1| gulonolactone oxidase, putative [Ricinus com...   383   e-104
ref|XP_002302668.1| predicted protein [Populus trichocarpa] gi|2...   381   e-104
ref|XP_002267268.1| PREDICTED: uncharacterized protein LOC100260...   377   e-102
ref|XP_002302669.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101

>ref|XP_002520499.1| d-lactate dehydrogenase, putative [Ricinus communis]
           gi|223540341|gb|EEF41912.1| d-lactate dehydrogenase,
           putative [Ricinus communis]
          Length = 579

 Score =  385 bits (990), Expect = e-105
 Identities = 178/278 (64%), Positives = 223/278 (80%)
 Frame = +2

Query: 5   RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 184
           R +LRL C+FL+ ++V S+PPEDP++C+ +N NCTITNSYG FPDR++C+AA V YPTTE
Sbjct: 5   RLLLRLTCLFLLFFIVISTPPEDPIECTSRNTNCTITNSYGTFPDRSICQAANVAYPTTE 64

Query: 185 KELIAAVAQASIDKRKVKVVTKYSHSIPKLVCPGGQDGLLISTRYLNHTIDVNPSTMTIA 364
           +ELI+ VA A+  KRK+KV T+YSHSIPKLVCP G+DGLLIST+ LNH + ++  +MT+ 
Sbjct: 65  EELISVVANATKAKRKMKVATRYSHSIPKLVCPDGKDGLLISTKNLNHVLSIDVQSMTMT 124

Query: 365 VESGVTLKEIIEQAAKAGLALPYTPYWWGLTIGGLLSTGAHGSTLWGKGSAVHDYVVGLR 544
           VESGVTL++II++ A AGLALPY PYWWGLTIGGLL TGAHGSTLWG GS+VHDYVVGL 
Sbjct: 125 VESGVTLRQIIDEGANAGLALPYAPYWWGLTIGGLLGTGAHGSTLWGIGSSVHDYVVGLT 184

Query: 545 IVTPAGPKEGYAKVRNLDNSHTDMDAAKXXXXXXXXXXXXXXKLQPLFKRSITFLAKNDS 724
           IV+P GP+ GYA VR LD  +++ +AAK              KLQPLFKRSIT++AK+D+
Sbjct: 185 IVSPGGPENGYANVRILDEKNSEFNAAKVSLGVLGVISKVTLKLQPLFKRSITYVAKDDT 244

Query: 725 DLADQIINFGNQHEFADIAWYPSQHKAVYRMDDRVPSN 838
           DL DQ  +FG QHEFADI WYP+Q KA+YR+DDR+ SN
Sbjct: 245 DLGDQATSFGLQHEFADITWYPTQSKAIYRIDDRISSN 282


>ref|XP_002529978.1| gulonolactone oxidase, putative [Ricinus communis]
           gi|223530540|gb|EEF32421.1| gulonolactone oxidase,
           putative [Ricinus communis]
          Length = 589

 Score =  383 bits (983), Expect = e-104
 Identities = 177/277 (63%), Positives = 219/277 (79%)
 Frame = +2

Query: 11  ILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTEKE 190
           +LR   + L++ +  S+PPEDP+KC+  N NCTITNSYG FPDR++CRAA V YPTTE+E
Sbjct: 7   LLRSAFLLLLLGIAVSTPPEDPIKCTSVNINCTITNSYGTFPDRSICRAANVAYPTTEEE 66

Query: 191 LIAAVAQASIDKRKVKVVTKYSHSIPKLVCPGGQDGLLISTRYLNHTIDVNPSTMTIAVE 370
           LI+ VA A+  KRK+K  T+YSHSIPKLVCP G+DGLLIST+YLNH + ++  +MT+ VE
Sbjct: 67  LISVVANATKSKRKMKAATRYSHSIPKLVCPDGEDGLLISTKYLNHVLSIDVRSMTMTVE 126

Query: 371 SGVTLKEIIEQAAKAGLALPYTPYWWGLTIGGLLSTGAHGSTLWGKGSAVHDYVVGLRIV 550
           SGVTL++II + A AGLALPY PYWWGLTIGGLLSTGAHGSTLWGKGS+VHDYVV L IV
Sbjct: 127 SGVTLRQIINEGANAGLALPYAPYWWGLTIGGLLSTGAHGSTLWGKGSSVHDYVVELTIV 186

Query: 551 TPAGPKEGYAKVRNLDNSHTDMDAAKXXXXXXXXXXXXXXKLQPLFKRSITFLAKNDSDL 730
           +P  P+ GY KVR L+  +++++AAK              KLQPLFKRSIT++AKND+DL
Sbjct: 187 SPGEPENGYVKVRRLEERNSELNAAKVSLGVLGVISKVTLKLQPLFKRSITYVAKNDTDL 246

Query: 731 ADQIINFGNQHEFADIAWYPSQHKAVYRMDDRVPSNV 841
            DQ   FG+QHEFADI WYPSQHKA+YR+DDR+ SN+
Sbjct: 247 GDQATTFGHQHEFADITWYPSQHKAIYRIDDRISSNI 283


>ref|XP_002302668.1| predicted protein [Populus trichocarpa] gi|222844394|gb|EEE81941.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  381 bits (979), Expect = e-104
 Identities = 180/279 (64%), Positives = 224/279 (80%), Gaps = 1/279 (0%)
 Frame = +2

Query: 5   RSILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTE 184
           R +L   C+ L V++V  SPPE+ +KCS  N NCTITNSYG FPDR++C+AA   YPTTE
Sbjct: 6   RVLLSASCLLLAVFMVGCSPPENHIKCSSTNTNCTITNSYGTFPDRSICQAANAAYPTTE 65

Query: 185 KELIAAVAQASIDKRKVKVVTKYSHSIPKLVCPGGQDGLLISTRYLNHTIDVNPSTMTIA 364
           +ELI+ VA A+  KRKVKV T+YSHSIPKLVCP GQ+GLLIST YLN T++++  +MT++
Sbjct: 66  EELISIVAAATKAKRKVKVATRYSHSIPKLVCPDGQNGLLISTDYLNRTLEIDVQSMTMS 125

Query: 365 VESGVTLKEIIEQAAKAGLALPYTPYWWGLTIGGLLSTGAHGSTLWGKGSAVHDYVVGLR 544
           VESGVTL+++I +AAKAGLALPY+PYWWGLTIGGLLSTGAHGSTLWGKGSA+HDYVV L 
Sbjct: 126 VESGVTLRQLINEAAKAGLALPYSPYWWGLTIGGLLSTGAHGSTLWGKGSAIHDYVVALT 185

Query: 545 IVTPAGPKEGYAKVRNLDNSHT-DMDAAKXXXXXXXXXXXXXXKLQPLFKRSITFLAKND 721
           I++P GP++GYAKVR+LD S++ ++DAAK              +LQPLFKRSI++  K D
Sbjct: 186 IISPGGPEDGYAKVRSLDESNSAELDAAKVSLGVLGVISKVTLQLQPLFKRSISYEVKKD 245

Query: 722 SDLADQIINFGNQHEFADIAWYPSQHKAVYRMDDRVPSN 838
           +DL DQ+ +FG QHEFADI WYPSQ KAVYR+DDR+ SN
Sbjct: 246 TDLGDQVASFGRQHEFADITWYPSQGKAVYRIDDRISSN 284


>ref|XP_002267268.1| PREDICTED: uncharacterized protein LOC100260872 [Vitis vinifera]
          Length = 565

 Score =  377 bits (969), Expect = e-102
 Identities = 174/260 (66%), Positives = 215/260 (82%)
 Frame = +2

Query: 59  SPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTEKELIAAVAQASIDKRKVK 238
           SPPEDP+KC+ +N NCTITNSYGAFPDR+ CRA+ V YPTTE+ELI+ VA+A++D+ K+K
Sbjct: 5   SPPEDPIKCASKNTNCTITNSYGAFPDRSRCRASAVAYPTTEEELISVVAKAAMDRTKMK 64

Query: 239 VVTKYSHSIPKLVCPGGQDGLLISTRYLNHTIDVNPSTMTIAVESGVTLKEIIEQAAKAG 418
            VT++SHSIPKLVC  G+DGLLIST+YLN T++++PS MTI++ESG TL+++I++AAKAG
Sbjct: 65  AVTRFSHSIPKLVCTDGEDGLLISTKYLNRTLNIDPSAMTISIESGATLRQVIDEAAKAG 124

Query: 419 LALPYTPYWWGLTIGGLLSTGAHGSTLWGKGSAVHDYVVGLRIVTPAGPKEGYAKVRNLD 598
           LALPY PYWWGLTIGGLLS+GAHGS+LW KGS+VH+YV  LRI+TPAG + GY +VR LD
Sbjct: 125 LALPYAPYWWGLTIGGLLSSGAHGSSLWSKGSSVHEYVEQLRIITPAGRENGYVQVRTLD 184

Query: 599 NSHTDMDAAKXXXXXXXXXXXXXXKLQPLFKRSITFLAKNDSDLADQIINFGNQHEFADI 778
            SH D++AAK              +LQPLFKRSI +  KNDSDLADQ   FG++HEFADI
Sbjct: 185 TSHEDLNAAKVSIGVLGVISQATLRLQPLFKRSIDYTTKNDSDLADQAATFGSRHEFADI 244

Query: 779 AWYPSQHKAVYRMDDRVPSN 838
            WYPSQ KAVYR+DDRVPSN
Sbjct: 245 TWYPSQGKAVYRIDDRVPSN 264


>ref|XP_002302669.1| predicted protein [Populus trichocarpa] gi|222844395|gb|EEE81942.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  374 bits (961), Expect = e-101
 Identities = 177/277 (63%), Positives = 223/277 (80%), Gaps = 1/277 (0%)
 Frame = +2

Query: 11  ILRLQCMFLVVYVVFSSPPEDPVKCSLQNKNCTITNSYGAFPDRTVCRAAEVVYPTTEKE 190
           +L    + L V++V  SPPE+ +KCS  N NCTITNSYG FPDR++C+AA V YPTTE+E
Sbjct: 8   LLSTSGLLLAVFMVACSPPENHIKCSSTNTNCTITNSYGTFPDRSLCQAANVAYPTTEEE 67

Query: 191 LIAAVAQASIDKRKVKVVTKYSHSIPKLVCPGGQDGLLISTRYLNHTIDVNPSTMTIAVE 370
           LI+ VA A+  +RKVKV T+YSHSIPKLVCP GQ+GLLIST YLN T++++  +M ++VE
Sbjct: 68  LISIVAGATEAERKVKVATRYSHSIPKLVCPDGQNGLLISTNYLNRTLEIDVQSMKMSVE 127

Query: 371 SGVTLKEIIEQAAKAGLALPYTPYWWGLTIGGLLSTGAHGSTLWGKGSAVHDYVVGLRIV 550
           SGVTL+++I +AAKAGLALPY+PYWWGLTIGGLLSTGAHGSTLWGKGSA+HDYVV L I+
Sbjct: 128 SGVTLRQLINEAAKAGLALPYSPYWWGLTIGGLLSTGAHGSTLWGKGSAIHDYVVALTII 187

Query: 551 TPAGPKEGYAKVRNLDNSH-TDMDAAKXXXXXXXXXXXXXXKLQPLFKRSITFLAKNDSD 727
           +P GP++GYAKVR+LD S+ T+++AAK              +LQPLFKRSI+++ K D+D
Sbjct: 188 SPGGPEDGYAKVRSLDESNSTELNAAKVSLGVLGVISKVTLQLQPLFKRSISYVVKKDTD 247

Query: 728 LADQIINFGNQHEFADIAWYPSQHKAVYRMDDRVPSN 838
           L DQ+ +FG QHEFADI WYPSQ KAVYR+DDR+ SN
Sbjct: 248 LGDQVASFGRQHEFADITWYPSQGKAVYRIDDRISSN 284


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