BLASTX nr result

ID: Coptis25_contig00037214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037214
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 4...    59   4e-07
ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 2...    59   5e-07
ref|XP_004145551.1| PREDICTED: probable protein phosphatase 2C 2...    58   9e-07
ref|XP_003527294.1| PREDICTED: probable protein phosphatase 2C 2...    57   1e-06
emb|CBI21565.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002275069.1| PREDICTED: probable protein phosphatase 2C 47-like [Vitis vinifera]
          Length = 388

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 211 AMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDG 32
           AMED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  
Sbjct: 27  AMEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSE 84

Query: 31  KH-FLPIFRSG 2
           K  +LP+ RSG
Sbjct: 85  KSGYLPVLRSG 95


>ref|XP_002273511.2| PREDICTED: probable protein phosphatase 2C 27 isoform 2 [Vitis
           vinifera]
          Length = 385

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = -1

Query: 247 VLKIGLVKDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSE 68
           +L +G  K     MEDE  ++   ++ KQ+T GKPPR    MRHC+SS RL+  ++ +  
Sbjct: 13  LLDVGYSKVNVSVMEDENSNN--SDNLKQLTNGKPPRHLSVMRHCISSARLLAATDFELG 70

Query: 67  IEFRGLKSPSDGKH-FLPIFRSG 2
                +KSP DGK  FLP+FRSG
Sbjct: 71  TGMI-VKSPPDGKSGFLPVFRSG 92


>ref|XP_004145551.1| PREDICTED: probable protein phosphatase 2C 27-like [Cucumis
           sativus] gi|449485097|ref|XP_004157069.1| PREDICTED:
           probable protein phosphatase 2C 27-like [Cucumis
           sativus]
          Length = 386

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/78 (43%), Positives = 42/78 (53%)
 Frame = -1

Query: 235 GLVKDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFR 56
           G  KD     +DE       NS KQM+ GKPPR    MRH VSS +L+  ++   + E  
Sbjct: 18  GYSKDNVSPTDDESSDSF--NSLKQMSSGKPPRHLSVMRHSVSSLKLIGQADLSLDAETL 75

Query: 55  GLKSPSDGKHFLPIFRSG 2
           G KSP     FLP+FRSG
Sbjct: 76  GNKSPDGKAGFLPVFRSG 93


>ref|XP_003527294.1| PREDICTED: probable protein phosphatase 2C 27-like [Glycine max]
          Length = 385

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = -1

Query: 226 KDERYAMEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLK 47
           KD  + ++D+   D+     K MT GKPPR   G+RH VS+ RL+  ++   ++   G K
Sbjct: 24  KDSAFVVDDQKSGDI-----KPMTKGKPPRHASGLRHSVSTTRLLAVADLSLDVGVTGSK 78

Query: 46  SPSDGK-HFLPIFRSG 2
           S S+ K  FLPIFRSG
Sbjct: 79  SSSEEKTEFLPIFRSG 94


>emb|CBI21565.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -1

Query: 208 MEDEGGSDVLDNSFKQMTIGKPPRDPLGMRHCVSSNRLVDGSESDSEIEFRGLKSPSDGK 29
           MED    + LD+S  Q+ IGKPPR    MRHC+SS RL   ++ +S+I    LKSPS  K
Sbjct: 1   MEDMN-DETLDHS-NQLNIGKPPRSLSVMRHCISSARLTGAADWESDIGIISLKSPSSEK 58

Query: 28  H-FLPIFRSG 2
             +LP+ RSG
Sbjct: 59  SGYLPVLRSG 68


Top