BLASTX nr result

ID: Coptis25_contig00037192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037192
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528476.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002522268.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003638415.1| hypothetical protein MTR_130s0033 [Medicago ...    60   2e-07
ref|XP_002336632.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002300450.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002528476.1| conserved hypothetical protein [Ricinus communis]
           gi|223532085|gb|EEF33893.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 435

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 284 VAGDPGNDYISAIGDPGMQRDDLRVAIESWNQCNE 388
           VAG   +DYISAIGDPGM+RDDLRVAIE+WNQCNE
Sbjct: 21  VAGAGQDDYISAIGDPGMKRDDLRVAIEAWNQCNE 55


>ref|XP_002522268.1| conserved hypothetical protein [Ricinus communis]
           gi|223538521|gb|EEF40126.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 506

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = +2

Query: 275 ISAVAGDPGNDYISAIGDPGMQRDDLRVAIESWNQCNE 388
           ++AV     N+YISAIGDPGM+RD LR+AIESWNQCNE
Sbjct: 20  LNAVCYRAANEYISAIGDPGMRRDSLRLAIESWNQCNE 57


>ref|XP_003638415.1| hypothetical protein MTR_130s0033 [Medicago truncatula]
           gi|355504350|gb|AES85553.1| hypothetical protein
           MTR_130s0033 [Medicago truncatula]
          Length = 113

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = +2

Query: 275 ISAVAGDPGNDYISAIGDPGMQRDDLRVAIESWNQCNE 388
           ++A+  D   DYISAIGDPGM+RD LRVAIESWNQCNE
Sbjct: 25  VNALLND--QDYISAIGDPGMKRDGLRVAIESWNQCNE 60


>ref|XP_002336632.1| predicted protein [Populus trichocarpa] gi|222836387|gb|EEE74794.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 269 AYISAVAGDPGNDYISAIGDPGMQRDDLRVAIESWNQCNE 388
           A  ++V     +D+ISA+GDPGM+RD LRVAIE+WNQCNE
Sbjct: 15  ACFTSVVMASNDDFISAVGDPGMRRDGLRVAIEAWNQCNE 54


>ref|XP_002300450.1| predicted protein [Populus trichocarpa] gi|222847708|gb|EEE85255.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +2

Query: 302 NDYISAIGDPGMQRDDLRVAIESWNQCNE 388
           +D+ISA+GDPGM+RD LRVAIE+WNQCNE
Sbjct: 26  DDFISAVGDPGMRRDGLRVAIEAWNQCNE 54


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