BLASTX nr result

ID: Coptis25_contig00037155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037155
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79197.1| hypothetical protein VITISV_000240 [Vitis vinifera]    61   1e-07
emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]    60   2e-07
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...    59   5e-07
emb|CAN73234.1| hypothetical protein VITISV_033857 [Vitis vinifera]    59   5e-07
emb|CAN69088.1| hypothetical protein VITISV_031062 [Vitis vinifera]    59   5e-07

>emb|CAN79197.1| hypothetical protein VITISV_000240 [Vitis vinifera]
          Length = 117

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   HFVCEKVHSNIVTTSFVRSDQQLADIFTNGLSASKFQDILSKLGSLDIFAPT*GGV 170
           HF+ EK+ S  V TSFV S+ QLADIFT  L   + + I +KLG+ D++AP  GGV
Sbjct: 56  HFIREKIASGYVATSFVNSNDQLADIFTKSLRGPRIKYIYNKLGAYDVYAPAWGGV 111


>emb|CAN79872.1| hypothetical protein VITISV_017186 [Vitis vinifera]
          Length = 908

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/52 (51%), Positives = 39/52 (75%)
 Frame = +3

Query: 3    HFVCEKVHSNIVTTSFVRSDQQLADIFTNGLSASKFQDILSKLGSLDIFAPT 158
            HF+ EK+ ++I+  SFV + QQ+ADI T GL  S F+ ++SKLG +DI+APT
Sbjct: 857  HFIKEKLEASIICMSFVPTTQQIADILTKGLFRSSFEFLISKLGMIDIYAPT 908


>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
          Length = 1390

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = +3

Query: 3    HFVCEKVHSNIVTTSFVRSDQQLADIFTNGLSASKFQDILSKLGSLDIFAPT 158
            HF+ EK+   IV+  FV+S++QLAD+ T+ + + KF+D L KLG  DI+APT
Sbjct: 1339 HFIKEKLERKIVSIPFVKSEEQLADVLTHAVCSRKFEDSLVKLGMCDIYAPT 1390


>emb|CAN73234.1| hypothetical protein VITISV_033857 [Vitis vinifera]
          Length = 1402

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +3

Query: 3    HFVCEKVHSNIVTTSFVRSDQQLADIFTNGLSASKFQDILSKLGSLDIFAP 155
            HF+ EK+ S  V TSFV S+ QLADIFTN L   + + I +KLG+ D++AP
Sbjct: 1351 HFIREKIASGCVATSFVNSNDQLADIFTNSLRGPRIKYICNKLGAYDVYAP 1401


>emb|CAN69088.1| hypothetical protein VITISV_031062 [Vitis vinifera]
          Length = 940

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +3

Query: 3    HFVCEKVHSNIVTTSFVRSDQQLADIFTNGLSASKFQDILSKLGSLDIFAPT*GGV 170
            HF+ EK+ S  V TSFV S+ QLA+IFT  L   + + I +KLG+ DI+APT  GV
Sbjct: 879  HFIREKIASRCVATSFVNSNDQLAEIFTKSLRGRRIKYICNKLGAYDIYAPTLKGV 934


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