BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037151
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25186.3| unnamed protein product [Vitis vinifera]              265   2e-68
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   264   5e-68
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   256   7e-66
ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-64
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-60

>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  265 bits (678), Expect = 2e-68
 Identities = 130/226 (57%), Positives = 167/226 (73%)
 Frame = -3

Query: 1344 LFHSLRLYDEMKKRGWIPDLDVYNSLIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNS 1165
            LF SLRL+D+MKKRGWIP L+VYNSLIYVLT ENCL EA  I+ KIKE GL  DS +YN 
Sbjct: 298  LFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNC 357

Query: 1164 MILPLCEAHNLEEAKSVFATMASMGLDPTSETYHAFLQVESVDATVELLKQMREAGYGPD 985
            MI PLC+A  LEEA+++ A M    L PT+ETYHAFL+  S + T E+LK +R AG+GP+
Sbjct: 358  MIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASYEETFEVLKNLRTAGFGPN 417

Query: 984  GHTFLLILRKLLKSKQPDNALRMWVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYD 805
            G TFLLIL  L K  QP+NAL++WVEM ++++VP S HY V++ GL+  GWL KAR+ Y 
Sbjct: 418  GDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYA 477

Query: 804  DMKSRGFPDDPKLEKVLKDPVGSVGEFGKQQGRHREEDTGNRRQKG 667
            +M+S+GF DDPKL+K+LKDPV   G+ G+++G  R+  T  R   G
Sbjct: 478  EMRSKGFLDDPKLKKLLKDPV--EGDSGEREGWMRQGKTDVRLHHG 521


>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
            mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  264 bits (674), Expect = 5e-68
 Identities = 128/219 (58%), Positives = 165/219 (75%)
 Frame = -3

Query: 1344 LFHSLRLYDEMKKRGWIPDLDVYNSLIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNS 1165
            LF SLRL+D+MKKRGWIP L+VYNSLIYVLT ENCL EA  I+ KIKE GL  DS +YN 
Sbjct: 298  LFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDSASYNC 357

Query: 1164 MILPLCEAHNLEEAKSVFATMASMGLDPTSETYHAFLQVESVDATVELLKQMREAGYGPD 985
            MI PLC+A  LEEA+++ A M    L PT+ETYHAFL+  S + T E+LK +R AG+GP+
Sbjct: 358  MIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASYEETFEVLKNLRTAGFGPN 417

Query: 984  GHTFLLILRKLLKSKQPDNALRMWVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYD 805
            G TFLLIL  L K  QP+NAL++WVEM ++++VP S HY V++ GL+  GWL KAR+ Y 
Sbjct: 418  GDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKARELYA 477

Query: 804  DMKSRGFPDDPKLEKVLKDPVGSVGEFGKQQGRHREEDT 688
            +M+S+GF DDPKL+K+LKDPV   G+ G+++G  R+  T
Sbjct: 478  EMRSKGFLDDPKLKKLLKDPV--EGDSGEREGWMRQGKT 514


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  256 bits (655), Expect = 7e-66
 Identities = 130/240 (54%), Positives = 168/240 (70%), Gaps = 5/240 (2%)
 Frame = -3

Query: 1344 LFHSLRLYDEMKKRGWIPDLDVYNSLIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNS 1165
            LF SLRLYDEMKKRGW+P ++VYNSLIYVLTRENC  EA   +DK+KE GL  DSTTYNS
Sbjct: 310  LFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDKMKEVGLQPDSTTYNS 369

Query: 1164 MILPLCEAHNLEEAKSVFATMASMGLDPTSETYHAFLQVESVD--ATVELLKQMREAGYG 991
            MI PLCE   L EA+SV ATM    + PT ETYHA L+VE+ D  AT+E+L +M  AG  
Sbjct: 370  MIRPLCEGKKLVEARSVLATMIEENISPTMETYHALLEVENSDFEATLEVLNRMTVAGLA 429

Query: 990  PDGHTFLLILRKLLKSKQPDNALRMWVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKF 811
            P   TFLL+L K  K +Q +NAL+MW+EM +YE+ P+  HY ++V GL  CG LAKAR+ 
Sbjct: 430  PTDDTFLLVLAKFFKLEQAENALKMWIEMKQYEVTPNLTHYKILVEGLVRCGLLAKAREC 489

Query: 810  YDDMKSRGFPDDPKLEKVLKDPVGSVGEFGKQ---QGRHREEDTGNRRQKGCKGRRKVQK 640
            Y DM+S GF DDPKL+K+LK+PV   G+  K+   +G+ + +   N +++    R+ V +
Sbjct: 490  YADMRSNGFTDDPKLQKMLKEPVR--GQNSKEKLCKGQVKRDGHVNHKRRSIVRRKSVHR 547


>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  253 bits (645), Expect = 1e-64
 Identities = 124/232 (53%), Positives = 162/232 (69%)
 Frame = -3

Query: 1344 LFHSLRLYDEMKKRGWIPDLDVYNSLIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNS 1165
            LF SLRLYD MKKRGW+P ++VYNSL+Y+LTRENC  EA  I+DK+KE GL  DS TYNS
Sbjct: 211  LFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEALKILDKMKETGLQRDSATYNS 270

Query: 1164 MILPLCEAHNLEEAKSVFATMASMGLDPTSETYHAFLQVESVDATVELLKQMREAGYGPD 985
            MI PLCEA  LE+A+S+ A M    + PT ETYHAFLQ    + T E+L +M+ AG GP 
Sbjct: 271  MIRPLCEAKKLEDARSLMAAMIEENVSPTIETYHAFLQGIVFEETFEVLDRMKIAGLGPT 330

Query: 984  GHTFLLILRKLLKSKQPDNALRMWVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYD 805
              TFLL+L K  K +QP+NAL++WVEM +YE+  +  HY+VMV GL+ CG L KAR++Y 
Sbjct: 331  EDTFLLLLAKFFKLEQPENALKIWVEMKQYEVASNLTHYTVMVEGLARCGLLTKAREYYA 390

Query: 804  DMKSRGFPDDPKLEKVLKDPVGSVGEFGKQQGRHREEDTGNRRQKGCKGRRK 649
            +M+S G+ DDPK++K+LK PV    +  K+ G   + +     +KG   RRK
Sbjct: 391  EMRSNGYSDDPKIQKMLKVPVQDKNDKRKKLGGQFKRNQHVSHKKGSMVRRK 442


>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
            mitochondrial-like [Cucumis sativus]
            gi|449509164|ref|XP_004163514.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g80880,
            mitochondrial-like [Cucumis sativus]
          Length = 547

 Score =  238 bits (606), Expect = 3e-60
 Identities = 117/218 (53%), Positives = 152/218 (69%), Gaps = 1/218 (0%)
 Frame = -3

Query: 1344 LFHSLRLYDEMKKRGWIPDLDVYNSLIYVLTRENCLNEAFNIVDKIKEAGLLADSTTYNS 1165
            LF SLR YD+MKKR WIP ++VYNSL YVLTRENC NEA  I++KIKE GL  DSTTYNS
Sbjct: 302  LFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTRENCFNEALKILEKIKEVGLRPDSTTYNS 361

Query: 1164 MILPLCEAHNLEEAKSVFATMASMGLDPTSETYHAFLQVESVDATVELLKQMREAGYGPD 985
            +I PLCEA  L+EAK V   M    + PT ETYH+F+Q      + ELLK+MR+ G GP 
Sbjct: 362  LISPLCEAGKLDEAKDVLTMMTEDNISPTIETYHSFIQAADSKMSFELLKRMRQDGLGPT 421

Query: 984  GHTFLLILRKLLKSKQPDNALRMWVEMMRYEIVPDSGHYSVMVRGLSLCGWLAKARKFYD 805
              TFL++  K  + ++P+ AL +WVEM RYE+ P   HYSV+++GL+ CG L KAR+ YD
Sbjct: 422  EGTFLIMFNKSFELEEPEYALNVWVEMKRYEVFPSCEHYSVLIQGLATCGHLKKARELYD 481

Query: 804  DMKSRGFPDDPKLEKVLKDP-VGSVGEFGKQQGRHREE 694
            +M   GF   PK++ +LK+P +GS+ E  +QQ RH  +
Sbjct: 482  EMILHGFIAHPKIKTLLKEPDLGSIDE-ARQQVRHNNK 518