BLASTX nr result

ID: Coptis25_contig00037123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037123
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525301.1| amino acid binding protein, putative [Ricinu...   107   8e-22
ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854...   102   2e-20
emb|CBI35746.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264...   102   2e-20
ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
           gi|223535459|gb|EEF37129.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/113 (51%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = -1

Query: 431 LSDISRVFRESGMSVSRADLGTHGDQAIGSFYVTDSSGNHIDPKTVDLVRNEIGEKVLKV 252
           LSD++RVFRE+G+S+SRA++G  GD+A+GSFY+TD+SG+  +  T++LVR EIG  VL V
Sbjct: 365 LSDVTRVFRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVV 424

Query: 251 NKSSVW----DSERYAXXXXXXXXXXXXXXXSLGSILWSQLERFSSNFGPIRS 105
           NKS  W     S                   SLGS+LWSQLER S NFG IRS
Sbjct: 425 NKSPGWTPRTPSTAGISRTSSGSVGEEKPKFSLGSLLWSQLERLSGNFGSIRS 477


>ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
           vinifera]
          Length = 338

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = -1

Query: 431 LSDISRVFRESGMSVSRADLGTHGDQAIGSFYVTDSSGNHIDPKTVDLVRNEIGEKVLKV 252
           LSDI+RVFRE+G+S+  A++G HG++A GSFYVTD SG  + P TV+L+R EIG  ++ V
Sbjct: 229 LSDITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAV 288

Query: 251 NKSSVWDS--ERYAXXXXXXXXXXXXXXXSLGSILWSQLERFSSNFGPI 111
           NKSSV  S     +               SLG+ LWSQ+ERFSSNFGPI
Sbjct: 289 NKSSVPPSLPASPSRDRSTASSVENRPRFSLGT-LWSQIERFSSNFGPI 336


>emb|CBI35746.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = -1

Query: 431 LSDISRVFRESGMSVSRADLGTHGDQAIGSFYVTDSSGNHIDPKTVDLVRNEIGEKVLKV 252
           LSDI+RVFRE+G+S+  A++G HG++A GSFYVTD SG  + P TV+L+R EIG  ++ V
Sbjct: 215 LSDITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAV 274

Query: 251 NKSSVWDS--ERYAXXXXXXXXXXXXXXXSLGSILWSQLERFSSNFGPI 111
           NKSSV  S     +               SLG+ LWSQ+ERFSSNFGPI
Sbjct: 275 NKSSVPPSLPASPSRDRSTASSVENRPRFSLGT-LWSQIERFSSNFGPI 322


>ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
           gi|296085715|emb|CBI29515.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
 Frame = -1

Query: 431 LSDISRVFRESGMSVSRADLGTHGDQAIGSFYVTDSSGNHIDPKTVDLVRNEIGEKVLKV 252
           LSDI+RVFRE+G+S+  A++G HG++A GSFYVTD SG  + P TV+L+R EIG  ++ V
Sbjct: 359 LSDITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAV 418

Query: 251 NKSSVWDS--ERYAXXXXXXXXXXXXXXXSLGSILWSQLERFSSNFGPI 111
           NKSSV  S     +               SLG+ LWSQ+ERFSSNFGPI
Sbjct: 419 NKSSVPPSLPASPSRDRSTASSVENRPRFSLGT-LWSQIERFSSNFGPI 466


>ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|222853233|gb|EEE90780.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
 Frame = -1

Query: 431 LSDISRVFRESGMSVSRADLGTHGDQAIGSFYVTDSSGNHIDPKTVDLVRNEIGEKVLKV 252
           LSD++R FRE+G+S+S A++GT+GD+A+GSFYVTD+SG   +P+ ++ V+ EIG  ++ V
Sbjct: 366 LSDLTRAFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGSIVVV 425

Query: 251 NKSSVWDSE--------RYAXXXXXXXXXXXXXXXSLGSILWSQLERFSSNFGPIRS 105
           NKS  W  +          +               SLGS+ WSQLER S+NF  IRS
Sbjct: 426 NKSPGWTPKTSKTPSVASISRTSSGSSIHEDKPRFSLGSLFWSQLERLSNNFSSIRS 482


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