BLASTX nr result

ID: Coptis25_contig00037120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037120
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   124   1e-26
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   124   2e-26
emb|CBI23591.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   123   3e-26

>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = +3

Query: 6   LQLVSNDRLKSSEHRVIANREGPRISVACFMSTFPDQKSTKLYGPIKELLSEENPPIYRE 185
           LQL+SND+ KS EHRV+ANR GPR+SVACF  T     ST++YGPIKELLSEE PP+YRE
Sbjct: 288 LQLISNDKFKSVEHRVLANRIGPRVSVACFF-TIHFYPSTRIYGPIKELLSEEXPPVYRE 346

Query: 186 TTIRDYFIYYYQKGLDGNSALTHFRL 263
           T+++D+  YYY KGLDGNSAL HF +
Sbjct: 347 TSLKDFIAYYYNKGLDGNSALDHFMI 372


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  124 bits (311), Expect = 1e-26
 Identities = 60/87 (68%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   FLQLVSNDRLKSSEHRVIANREGPRISVACFMSTFPDQKSTKLYGPIKELLSEENPPIYR 182
           F+ L+SND+ KS EHRV+ANR GPRISVACF ST   Q S+KLYGPIKELLSE NPPIYR
Sbjct: 294 FISLISNDKFKSVEHRVLANRVGPRISVACFFST-SFQPSSKLYGPIKELLSEYNPPIYR 352

Query: 183 ETTIRDYFIYYYQKGLDGNSALTHFRL 263
           ETT+ +Y  Y+Y  GLDG S L HF+L
Sbjct: 353 ETTVNEYLSYFYDHGLDGTSPLIHFKL 379


>ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 362

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/86 (70%), Positives = 69/86 (80%)
 Frame = +3

Query: 6   LQLVSNDRLKSSEHRVIANREGPRISVACFMSTFPDQKSTKLYGPIKELLSEENPPIYRE 185
           LQL++NDR KS EHRV+ANR GPR+SVACF ST     S+KLYGPIKELLSEENPP YRE
Sbjct: 279 LQLITNDRFKSVEHRVLANRRGPRVSVACFFSTH--LPSSKLYGPIKELLSEENPPKYRE 336

Query: 186 TTIRDYFIYYYQKGLDGNSALTHFRL 263
           TT+RDY +Y   KGL G SAL HF+L
Sbjct: 337 TTVRDYALYLRSKGLGGTSALPHFKL 362


>emb|CBI23591.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  123 bits (309), Expect = 3e-26
 Identities = 61/86 (70%), Positives = 69/86 (80%)
 Frame = +3

Query: 6   LQLVSNDRLKSSEHRVIANREGPRISVACFMSTFPDQKSTKLYGPIKELLSEENPPIYRE 185
           LQL++NDR KS EHRV+AN  GPR+SVACF ST   Q S+KLYGPIKELLSEENPP Y+E
Sbjct: 122 LQLITNDRFKSVEHRVLANHIGPRVSVACFFST-SIQPSSKLYGPIKELLSEENPPKYKE 180

Query: 186 TTIRDYFIYYYQKGLDGNSALTHFRL 263
           TT+ DY  Y+  KGLDG SAL HFRL
Sbjct: 181 TTVGDYVAYFNSKGLDGTSALPHFRL 206


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  123 bits (309), Expect = 3e-26
 Identities = 61/86 (70%), Positives = 69/86 (80%)
 Frame = +3

Query: 6   LQLVSNDRLKSSEHRVIANREGPRISVACFMSTFPDQKSTKLYGPIKELLSEENPPIYRE 185
           LQL++NDR KS EHRV+AN  GPR+SVACF ST   Q S+KLYGPIKELLSEENPP Y+E
Sbjct: 281 LQLITNDRFKSVEHRVLANHIGPRVSVACFFST-SIQPSSKLYGPIKELLSEENPPKYKE 339

Query: 186 TTIRDYFIYYYQKGLDGNSALTHFRL 263
           TT+ DY  Y+  KGLDG SAL HFRL
Sbjct: 340 TTVGDYVAYFNSKGLDGTSALPHFRL 365


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