BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037113
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77588.1| unknown [Picea sitchensis]                             130   1e-28
emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera]   130   1e-28
ref|XP_002889587.1| pentatricopeptide repeat-containing protein ...   127   9e-28
ref|NP_172104.1| pentatricopeptide repeat-containing protein [Ar...   125   3e-27
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   124   6e-27

>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = -3

Query: 301 EAALALFDQMVAEGAVPNSITFIGVLNACSHAGLVNEGWKQFNSMGSKYGITPSGKHYAC 122
           E AL LF QM   G  PN ITFI VL+ACSHAGLV+EGWK +N M   Y ITP+ +HYAC
Sbjct: 23  EDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYAC 82

Query: 121 IVDILGRRGHFEDVRDFIVQMPLQPTASLWGALLSACKTH 2
           +VD+LGR GH  +  DFI +MP++P AS+WGA L +C+ H
Sbjct: 83  MVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIH 122


>emb|CAN71830.1| hypothetical protein VITISV_033606 [Vitis vinifera]
          Length = 799

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/119 (54%), Positives = 78/119 (65%), Gaps = 19/119 (15%)
 Frame = -3

Query: 301 EAALALFDQMVAEGAVPNSITFI-------------------GVLNACSHAGLVNEGWKQ 179
           + +L  F ++  +G  PNSIT                     GVL+ACS AG+VNEGW+ 
Sbjct: 571 DESLKHFRELQLKGLKPNSITIASILPACAQSATLSHGKSIHGVLSACSQAGMVNEGWEH 630

Query: 178 FNSMGSKYGITPSGKHYACIVDILGRRGHFEDVRDFIVQMPLQPTASLWGALLSACKTH 2
           FN+M  KYG+ P+GKHY CIVD+LGR G FED R+FI QM LQPTASLWGALLSACK H
Sbjct: 631 FNNMDPKYGLIPTGKHYTCIVDLLGRAGLFEDARNFIFQMSLQPTASLWGALLSACKMH 689


>ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335429|gb|EFH65846.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 558

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/100 (56%), Positives = 72/100 (72%)
 Frame = -3

Query: 301 EAALALFDQMVAEGAVPNSITFIGVLNACSHAGLVNEGWKQFNSMGSKYGITPSGKHYAC 122
           E AL  FD M ++  VPNS+TF+ +L+ACSH+G V EGWKQF SM   YG+ P  +HYAC
Sbjct: 395 EEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEEHYAC 454

Query: 121 IVDILGRRGHFEDVRDFIVQMPLQPTASLWGALLSACKTH 2
           +VD+LGR G   + + FI  MP++P AS WGALLSAC+ H
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494


>ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
           gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity
           to a hypothetical protein F24K9.13 gi|6006885 from
           Arabidopsis thaliana gb|AC008153 and contains multiple
           PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|332189825|gb|AEE27946.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 558

 Score =  125 bits (315), Expect = 3e-27
 Identities = 55/100 (55%), Positives = 72/100 (72%)
 Frame = -3

Query: 301 EAALALFDQMVAEGAVPNSITFIGVLNACSHAGLVNEGWKQFNSMGSKYGITPSGKHYAC 122
           E AL  F +M ++  VPNS+TF+ +L+ACSH+G V EGWKQF SM   YG+ P  +HYAC
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454

Query: 121 IVDILGRRGHFEDVRDFIVQMPLQPTASLWGALLSACKTH 2
           +VD+LGR G   + + FI  MP++P AS WGALLSAC+ H
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
           gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|218190072|gb|EEC72499.1| hypothetical protein
           OsI_05871 [Oryza sativa Indica Group]
           gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
           Japonica Group]
          Length = 922

 Score =  124 bits (312), Expect = 6e-27
 Identities = 52/98 (53%), Positives = 69/98 (70%)
 Frame = -3

Query: 295 ALALFDQMVAEGAVPNSITFIGVLNACSHAGLVNEGWKQFNSMGSKYGITPSGKHYACIV 116
           A+ ++  M + G +PN +TF+G+LNACSHAGLV+EGWK F SM   YG+TP  +HYAC+V
Sbjct: 635 AIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMV 694

Query: 115 DILGRRGHFEDVRDFIVQMPLQPTASLWGALLSACKTH 2
           D+LGR G  +    FI  MP++P   +W ALL ACK H
Sbjct: 695 DLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIH 732