BLASTX nr result

ID: Coptis25_contig00037111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037111
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70122.1| transcriptional factor B3 family protein / AT hoo...    98   6e-19
gb|EEC71407.1| hypothetical protein OsI_03573 [Oryza sativa Indi...    82   6e-14
emb|CAN82372.1| hypothetical protein VITISV_027623 [Vitis vinifera]    82   6e-14
ref|NP_001172546.1| Os01g0723500 [Oryza sativa Japonica Group] g...    82   6e-14
ref|XP_003549416.1| PREDICTED: B3 domain-containing protein Os01...    77   1e-12

>gb|ABF70122.1| transcriptional factor B3 family protein / AT hook motif-containing
           protein [Musa balbisiana]
          Length = 331

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
 Frame = -2

Query: 385 PNFMEHISKEQTGSANLEGPSGKIWCVRLCKREDRTFLKNGWQDFVKDHSLGNFEFMVFI 206
           P F++HIS   +  A L+GPSG  W V L K    TFL  GW  FVKDHSL  +EF+VF 
Sbjct: 23  PKFLKHISSVGSKKAILQGPSGSKWHVELGKDMKDTFLTTGWPKFVKDHSLREYEFLVFQ 82

Query: 205 YEGTMCFKVQIFDMTGCEVVDGF-----QEPALSGGRRKQGRPP 89
           Y+G M F V IFD + CE  D F     ++P    G+RK+GRPP
Sbjct: 83  YDGDMRFTVLIFDTSACEREDAFAVRPRRKPRQCEGKRKRGRPP 126


>gb|EEC71407.1| hypothetical protein OsI_03573 [Oryza sativa Indica Group]
          Length = 401

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
 Frame = -2

Query: 385 PNFMEHIS----------KEQTGSANLEGPSGKIWCVRLCKREDRTFLKNGWQDFVKDHS 236
           PNF +HI           KE + +A LEGPSG+ W V + +  + TF  +GW  FV+D +
Sbjct: 36  PNFCKHIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQA 95

Query: 235 LGNFEFMVFIYEGTMCFKVQIFDMTGCEVVDGFQEPALSGG-----RRKQGRPPNKVFAV 71
           L   EF+VF Y+G   F   +FD T CE     +E  + GG     R+K+GRP     A 
Sbjct: 96  LRELEFVVFRYDGNTRFTAMVFDRTACE-----REDLMGGGGGDRPRKKRGRPRT---AA 147

Query: 70  PRRGRGRPPSHQQGR 26
             R   RP     G+
Sbjct: 148 ASRDAARPKKDSVGK 162


>emb|CAN82372.1| hypothetical protein VITISV_027623 [Vitis vinifera]
          Length = 492

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/96 (40%), Positives = 61/96 (63%)
 Frame = -2

Query: 385 PNFMEHISKEQTGSANLEGPSGKIWCVRLCKREDRTFLKNGWQDFVKDHSLGNFEFMVFI 206
           P FMEH+S+E +  A L GPSG  W V +    + T+L+ GW+ F+K+++LG+ EF+ F 
Sbjct: 277 PAFMEHLSQEMSNRATLTGPSGSQWRVTVSTDANGTYLQKGWKQFMKENNLGDSEFLTFR 336

Query: 205 YEGTMCFKVQIFDMTGCEVVDGFQEPALSGGRRKQG 98
           Y+G M F V+IFD +G + +       +SG R ++G
Sbjct: 337 YDGNMQFYVKIFDKSGVQRLAAL----VSGNRTQEG 368


>ref|NP_001172546.1| Os01g0723500 [Oryza sativa Japonica Group]
           gi|75159252|sp|Q8S2E6.1|Y1235_ORYSJ RecName: Full=B3
           domain-containing protein Os01g0723500
           gi|20160548|dbj|BAB89497.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|255673640|dbj|BAH91276.1|
           Os01g0723500 [Oryza sativa Japonica Group]
          Length = 402

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
 Frame = -2

Query: 385 PNFMEHIS----------KEQTGSANLEGPSGKIWCVRLCKREDRTFLKNGWQDFVKDHS 236
           PNF +HI           KE + +A LEGPSG+ W V + +  + TF  +GW  FV+D +
Sbjct: 37  PNFCKHIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQA 96

Query: 235 LGNFEFMVFIYEGTMCFKVQIFDMTGCEVVDGFQEPALSGG-----RRKQGRPPNKVFAV 71
           L   EF+VF Y+G   F   +FD T CE     +E  + GG     R+K+GRP     A 
Sbjct: 97  LRELEFVVFRYDGNTRFTAMVFDRTACE-----REDLMGGGGGDRPRKKRGRPRT---AA 148

Query: 70  PRRGRGRPPSHQQGR 26
             R   RP     G+
Sbjct: 149 ASRDAARPKKDSVGK 163


>ref|XP_003549416.1| PREDICTED: B3 domain-containing protein Os01g0723500-like [Glycine
           max]
          Length = 561

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/76 (48%), Positives = 47/76 (61%)
 Frame = -2

Query: 379 FMEHISKEQTGSANLEGPSGKIWCVRLCKREDRTFLKNGWQDFVKDHSLGNFEFMVFIYE 200
           F+ H+     GS +L GPSGK W V+L K+E+  FL +GW  FV DH L   E +VF YE
Sbjct: 25  FVCHMEGRTYGSVSLTGPSGKTWTVQLIKQENDLFLHHGWSTFVVDHQLECGELLVFRYE 84

Query: 199 GTMCFKVQIFDMTGCE 152
           G + F VQ+FD   CE
Sbjct: 85  GHLHFTVQVFDKDACE 100


Top