BLASTX nr result

ID: Coptis25_contig00037085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037085
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase N...    55   8e-06

>ref|XP_002282977.2| PREDICTED: serine/threonine-protein kinase Nek6-like [Vitis
           vinifera]
          Length = 597

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -2

Query: 351 DVRIETKRVDPTSCHRDPYTVDRGLKGKGKEEHANPDFIQKLESTDTETSFGGSTITHQE 172
           + R+ TKRVDPTSC+      ++GL         +P+F ++ E+++ ET+   ++ THQE
Sbjct: 341 EARVHTKRVDPTSCYDQMPKANKGLV-------VDPNFTEQTENSNAETASVRTSSTHQE 393

Query: 171 DEEHKSQLKRCEQVEETEVAKKGVSTKESQVRHS--EQLIEAEIPTS 37
           D E    +  C Q    +V K+G  T E+       E L    IP S
Sbjct: 394 DVEPDELISECAQ----KVKKEGQVTDEADTEEERLETLYAGPIPPS 436


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