BLASTX nr result

ID: Coptis25_contig00037040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037040
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ53107.1| aromatic prenyltransferase [Epimedium acuminatum]       82   4e-14
gb|ACU19244.1| unknown [Glycine max]                                   82   5e-14
ref|NP_001241496.1| homogentisate phytyltransferase 1, chloropla...    82   5e-14
ref|XP_002267306.1| PREDICTED: homogentisate phytyltransferase 1...    80   1e-13
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...    80   1e-13

>gb|AEZ53107.1| aromatic prenyltransferase [Epimedium acuminatum]
          Length = 407

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 38/57 (66%), Positives = 47/57 (82%)
 Frame = +3

Query: 3   PLMYSKLVTVLGHGILASILWLRAKSVNISDHEAVSAFYRFVWKLLYAEYLLIPFVR 173
           P   SKLVTVLGH +LASILWL AKSV++++  A+++FY F+WKL YAEYLLIP VR
Sbjct: 351 PSPLSKLVTVLGHVVLASILWLNAKSVDLTNKTAITSFYMFIWKLFYAEYLLIPLVR 407


>gb|ACU19244.1| unknown [Glycine max]
          Length = 395

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   PLMYSKLVTVLGHGILASILWLRAKSVNISDHEAVSAFYRFVWKLLYAEYLLIPFVR 173
           P ++SK+VT LGH +LASILW  AKSV++    ++++FY F+WKL YAEYLLIPFVR
Sbjct: 339 PCLWSKIVTGLGHAVLASILWFHAKSVDLKSKASITSFYMFIWKLFYAEYLLIPFVR 395


>ref|NP_001241496.1| homogentisate phytyltransferase 1, chloroplastic-like [Glycine max]
           gi|81295666|gb|ABB70126.1| homogentisate
           phytyltransferase VTE2-1 [Glycine max]
          Length = 395

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = +3

Query: 3   PLMYSKLVTVLGHGILASILWLRAKSVNISDHEAVSAFYRFVWKLLYAEYLLIPFVR 173
           P ++SK+VT LGH +LASILW  AKSV++    ++++FY F+WKL YAEYLLIPFVR
Sbjct: 339 PCLWSKIVTGLGHAVLASILWFHAKSVDLKSKASITSFYMFIWKLFYAEYLLIPFVR 395


>ref|XP_002267306.1| PREDICTED: homogentisate phytyltransferase 1, chloroplastic [Vitis
           vinifera] gi|297735423|emb|CBI17863.3| unnamed protein
           product [Vitis vinifera]
          Length = 406

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/55 (63%), Positives = 45/55 (81%)
 Frame = +3

Query: 9   MYSKLVTVLGHGILASILWLRAKSVNISDHEAVSAFYRFVWKLLYAEYLLIPFVR 173
           ++SKLVTVLGH +LASILW RAKSV++    A+++FY F+W+L YAEY LIP VR
Sbjct: 352 LWSKLVTVLGHAVLASILWTRAKSVDLKSKAAITSFYMFIWQLFYAEYFLIPLVR 406


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = +3

Query: 6   LMYSKLVTVLGHGILASILWLRAKSVNISDHEAVSAFYRFVWKLLYAEYLLIPFVR 173
           L+ SKLVTV GH ILASILW RA SV++  ++++++FY F+WKL YAEYLLIPFVR
Sbjct: 262 LLLSKLVTVTGHCILASILWSRAISVDLESNKSITSFYMFIWKLFYAEYLLIPFVR 317


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