BLASTX nr result

ID: Coptis25_contig00037022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00037022
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...    66   3e-09
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...    62   5e-08

>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/96 (39%), Positives = 53/96 (55%)
 Frame = -3

Query: 295 SKNGYLVGPRILSYASRLAYEAHKIDRLGTPKDENNFSGISSSETLLLKHHIDKYVSFMT 116
           S+NG  VG  +LSYAS+LAYEA+     G     NN S +  S+  LL  H+D Y S   
Sbjct: 606 SRNGLPVGAHLLSYASQLAYEAYVAGYSGNAMAHNNLSKLGESDMPLLTFHLDGYFSLTN 665

Query: 115 IRGKGSANVIPPASKIDSKQVIELIRGAFTSCRSFL 8
            R   +   I P S++D K VI+L+  +F + + FL
Sbjct: 666 DRILRACKDIVPISELDKKSVIKLVENSFAAYKCFL 701


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/96 (41%), Positives = 53/96 (55%)
 Frame = -3

Query: 295 SKNGYLVGPRILSYASRLAYEAHKIDRLGTPKDENNFSGISSSETLLLKHHIDKYVSFMT 116
           S+NG+ VG  +LSYA+RLAYEA   D  G     NNFS IS S   LL  H+D Y S + 
Sbjct: 647 SRNGFHVGAHLLSYATRLAYEACISDSSGNAIINNNFSKISDSGMSLLLFHVDGYFSILN 706

Query: 115 IRGKGSANVIPPASKIDSKQVIELIRGAFTSCRSFL 8
            R +         SK+D + V  L++ AF + + FL
Sbjct: 707 GRKQDFLEGSVSTSKMDKELVNMLVKNAFAAYKCFL 742


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/97 (42%), Positives = 54/97 (55%)
 Frame = -3

Query: 295 SKNGYLVGPRILSYASRLAYEAHKIDRLGTPKDENNFSGISSSETLLLKHHIDKYVSFMT 116
           SK G+ VG  +LSYA RLAYEAH    LG     +N   ++  E  LL  H+D Y SF+ 
Sbjct: 574 SKQGFPVGRCLLSYALRLAYEAHAGGYLGNVMVPDNSVKVNDLEMPLLVFHMDVYFSFLN 633

Query: 115 IRGKGSANVIPPASKIDSKQVIELIRGAFTSCRSFLM 5
              K        ASK+D + V +L+ GAF++ R FLM
Sbjct: 634 GGRKDPPEADLSASKMDHQLVAKLVDGAFSAYRCFLM 670


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/96 (36%), Positives = 53/96 (55%)
 Frame = -3

Query: 295 SKNGYLVGPRILSYASRLAYEAHKIDRLGTPKDENNFSGISSSETLLLKHHIDKYVSFMT 116
           S+NG  VG R+LSY +RLAYEA+K       + EN+      S T LL  H++ Y SF  
Sbjct: 643 SRNGLPVGARLLSYVTRLAYEANKAGLTENVEFENSEKAEMDSNTQLLLFHVNGYFSFRN 702

Query: 115 IRGKGSANVIPPASKIDSKQVIELIRGAFTSCRSFL 8
             G+     +   S I+ +++ +L+  AF++ R FL
Sbjct: 703 GMGEYPQETVLSFSGINKEEIAKLVTNAFSAYRCFL 738


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