BLASTX nr result

ID: Coptis25_contig00036490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036490
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]         199   3e-49
emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]   163   2e-38
sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short...   154   2e-35
gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerari...   144   1e-32
emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]   122   5e-26

>dbj|BAC10911.1| pathogenesis-related protein [Zinnia elegans]
          Length = 158

 Score =  199 bits (506), Expect = 3e-49
 Identities = 89/145 (61%), Positives = 116/145 (80%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M +V++E+E  S  P +KVFK F+DF+NIAPK  P+VFKS++T+EG G  G+++LFTFGD
Sbjct: 1   MVSVTLEVEVSSQIPVEKVFKVFSDFDNIAPKVNPQVFKSIETVEGDGDVGSVKLFTFGD 60

Query: 189 VVPYKSGKQRVDLVDASNHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVFKQTVVY 368
            VP+ SGK +VD +D SN+SY++TFFEGD L G+L+S+ +HVK+ PSPNGGSVFKQT+VY
Sbjct: 61  AVPFTSGKCKVDAIDVSNYSYSYTFFEGDSLFGVLDSINNHVKVVPSPNGGSVFKQTIVY 120

Query: 369 NCKGTEKPSEETLKFEKEALEKTIK 443
           NCKG EKPSEE LK +K   E T K
Sbjct: 121 NCKGDEKPSEEILKQDKXTYENTFK 145


>emb|CAB71301.2| vegetative storage protein, VSP [Cichorium intybus]
          Length = 158

 Score =  163 bits (413), Expect = 2e-38
 Identities = 77/145 (53%), Positives = 100/145 (68%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M  V++EIE  SS PA K+FK F+DF+ +APK  PE +K+V  IEG GG GTI+  T+GD
Sbjct: 1   MAVVTVEIEVSSSLPAAKLFKVFSDFDTLAPKVEPETYKAVNIIEGDGGVGTIKSITYGD 60

Query: 189 VVPYKSGKQRVDLVDASNHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVFKQTVVY 368
            VP+ S K +VD VD SN S  +T FEGDVL+GI+ES  HHVK  PS +GG+V+K TVV+
Sbjct: 61  GVPFTSSKHKVDTVDTSNFSLTYTIFEGDVLMGIVESANHHVKFVPSADGGAVYKHTVVF 120

Query: 369 NCKGTEKPSEETLKFEKEALEKTIK 443
            CKG     E+T+   KE  +K+ K
Sbjct: 121 TCKGDNTVPEDTINLMKEGFKKSFK 145


>sp|O49065.1|RAP_TAROF RecName: Full=Root allergen protein; Short=RAP
           gi|2707295|gb|AAB92255.1| root allergen protein
           [Taraxacum officinale]
          Length = 157

 Score =  154 bits (388), Expect = 2e-35
 Identities = 74/140 (52%), Positives = 99/140 (70%), Gaps = 1/140 (0%)
 Frame = +3

Query: 27  EIEHPSSFPADKVFKAFT-DFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGDVVPYK 203
           E E  SS     +FKAF  DF+ IAPKA PE +KS+KTIEG GG GTI+  T+ D VP+ 
Sbjct: 5   EFEITSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFT 64

Query: 204 SGKQRVDLVDASNHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVFKQTVVYNCKGT 383
           S K +VD +D++N S ++T FEGDVL+GI+ES THH+K  PS +GGSV+K ++V+ CKG 
Sbjct: 65  SSKHKVDAIDSNNFSISYTIFEGDVLMGIIESGTHHLKFLPSADGGSVYKHSMVFKCKGD 124

Query: 384 EKPSEETLKFEKEALEKTIK 443
            K ++E +   KE L+KT K
Sbjct: 125 AKLTDENVSLMKEGLKKTFK 144


>gb|AEL17175.1| pathogen-related protein PR10 [Tanacetum cinerariifolium]
          Length = 157

 Score =  144 bits (364), Expect = 1e-32
 Identities = 71/145 (48%), Positives = 97/145 (66%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFTDFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFGD 188
           M+ ++ E E  SS PADK+FK   DF+ +A K  P+ FKS+  I+G GG G+I+  T+GD
Sbjct: 1   MSVINREFEVRSSLPADKLFKLCLDFDTLAAKIEPQAFKSIDLIKGDGGVGSIKRTTYGD 60

Query: 189 VVPYKSGKQRVDLVDASNHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVFKQTVVY 368
            VP+ S K ++D +DASN S  +T FEGD L+G L+S THH K+ PS +GG+VFK  +V+
Sbjct: 61  AVPFTSAKYKIDAIDASNFSGTYTVFEGDALMG-LDSATHHFKLVPSADGGAVFKDNIVF 119

Query: 369 NCKGTEKPSEETLKFEKEALEKTIK 443
             KG  KP+EETL   KE  + T K
Sbjct: 120 KGKGDAKPTEETLNQFKELFKNTFK 144


>emb|CAN67367.1| hypothetical protein VITISV_007417 [Vitis vinifera]
          Length = 159

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/139 (44%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
 Frame = +3

Query: 9   MTTVSIEIEHPSSFPADKVFKAFT-DFENIAPKAIPEVFKSVKTIEGTGGPGTIRLFTFG 185
           M  +S E E  SS P  K+FKAF  D +N+ PK +P+  K V+ IEG GGPG+I+  TFG
Sbjct: 1   MGVISYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFG 60

Query: 186 DVVPYKSGKQRVDLVDASNHSYNFTFFEGDVLLGILESVTHHVKISPSPNGGSVFKQTVV 365
           +   +   K RVD +D  N +Y+++  EGD L+G LES+++ VK+  SPNGGS+ K T  
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYSYSLIEGDALMGTLESISYEVKLVASPNGGSICKSTSK 120

Query: 366 YNCKGTEKPSEETLKFEKE 422
           Y+ KG  + +E+ +K  KE
Sbjct: 121 YHTKGDFEITEDQIKAGKE 139


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