BLASTX nr result

ID: Coptis25_contig00036481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036481
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513597.1| Ethylene-responsive transcription factor, pu...    97   2e-18
gb|ADE41106.1| AP2 domain class transcription factor [Malus x do...    96   7e-18
ref|XP_002331847.1| AP2/ERF domain-containing transcription fact...    86   9e-15
ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription...    82   7e-14
ref|XP_002271526.1| PREDICTED: ethylene-responsive transcription...    81   2e-13

>ref|XP_002513597.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223547505|gb|EEF49000.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 309

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
 Frame = -1

Query: 349 METSFYPPIKYTEHKNITKKLIKPSVK-RSPITDSSSLSS-----KRVVRFSVTDNNATD 188
           ++ S   P+K+TEHK ITKK  KPS+K + P +D  S         RVVR SVTD +ATD
Sbjct: 2   LDQSILCPMKFTEHKRITKKYTKPSLKPKKPSSDERSSCRLEHIPPRVVRISVTDPDATD 61

Query: 187 SSSDEEDEFFTRHRVKRYINEIDIESC-TPEPAKVNVGLKSRSKKSLENKANKRTKLVT 14
           SSSDEEDE F+R RVKRY+NEI IE+  T E   V+ G K  +   L N   +  KL T
Sbjct: 62  SSSDEEDELFSRQRVKRYVNEISIEAASTKETNLVSSGRKRAAANELPNTTQRPLKLNT 120


>gb|ADE41106.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 353

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 53/107 (49%), Positives = 73/107 (68%)
 Frame = -1

Query: 349 METSFYPPIKYTEHKNITKKLIKPSVKRSPITDSSSLSSKRVVRFSVTDNNATDSSSDEE 170
           ME+S   PIKY+EH++ TKKL+KP  K +  ++S+S  + R+VR SVTD +ATDSSSDEE
Sbjct: 1   MESSILCPIKYSEHRSTTKKLMKPRKKAT--SESASTVTPRIVRISVTDPDATDSSSDEE 58

Query: 169 DEFFTRHRVKRYINEIDIESCTPEPAKVNVGLKSRSKKSLENKANKR 29
           +EFF R RVK Y+NEI+IE+       +N G   R + + E   N+R
Sbjct: 59  EEFFGRQRVKHYVNEINIETDFRNSLVINNG---RKRPAAEVPVNRR 102


>ref|XP_002331847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222875085|gb|EEF12216.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 363

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
 Frame = -1

Query: 349 METSFYPPIKYTEHKNITKKLIKPSVK--RSPITDSSSL-----SSKRVVRFSVTDNNAT 191
           ++ S   PIKYTEHK +TK+  KPS+K  + P  D   L        R+VR +VTD++AT
Sbjct: 2   IDQSILCPIKYTEHKKVTKQFTKPSLKPKKLPSDDRCRLLEPSNPQPRLVRVTVTDHDAT 61

Query: 190 DSSSDEEDEFFTRHRVKRYINEIDIESCTPEPAKVNVGLKSRSKKSL 50
           DSSSDEE   F R RVKRY+NEIDI++   E   +   + +  K+ +
Sbjct: 62  DSSSDEEGGLFGRQRVKRYVNEIDIQASCKETNAITTAVANNRKRGV 108


>ref|XP_002267400.1| PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis
           vinifera] gi|147838098|emb|CAN74147.1| hypothetical
           protein VITISV_018946 [Vitis vinifera]
          Length = 341

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 48/88 (54%), Positives = 59/88 (67%)
 Frame = -1

Query: 349 METSFYPPIKYTEHKNITKKLIKPSVKRSPITDSSSLSSKRVVRFSVTDNNATDSSSDEE 170
           M+ S   PIKYTEH++IT K  + S  R P   +S +   RVVR SVTD +ATDSSSDEE
Sbjct: 1   MDQSLLYPIKYTEHRSITNKQTRQS--RRPPEQNSGVP--RVVRISVTDPDATDSSSDEE 56

Query: 169 DEFFTRHRVKRYINEIDIESCTPEPAKV 86
           DE F+R RVKRY NEI+I + +   A V
Sbjct: 57  DELFSRQRVKRYTNEINIATVSKSIAPV 84


>ref|XP_002271526.1| PREDICTED: ethylene-responsive transcription factor CRF2 [Vitis
           vinifera]
          Length = 327

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = -1

Query: 328 PIKYTEHKNITKKLIKPSVKRSPITDSSSLSSKRVVRFSVTDNNATDSSSDEEDEFFTRH 149
           PIKY+EH+  TK L   S K +    S +    R+VR SVTD +ATDSSSDEE E F R 
Sbjct: 4   PIKYSEHRKRTKLLTTSSEKFTG--RSMNADGPRIVRISVTDGDATDSSSDEEGELFARQ 61

Query: 148 RVKRYINEIDIESCTPEPAKVNVGLKSRSKKSLENKA 38
           RVK+++NEI I+SC+ E +      +SRS ++   K+
Sbjct: 62  RVKKFVNEITIQSCSGENSDGTTVWRSRSARNGRKKS 98


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