BLASTX nr result

ID: Coptis25_contig00036475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036475
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276606.1| PREDICTED: probable serine/threonine-protein...    64   1e-08
emb|CBI26114.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002328382.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002512278.1| Serine/threonine-protein kinase cdk9, putati...    57   1e-06
ref|XP_002516867.1| ATP binding protein, putative [Ricinus commu...    56   3e-06

>ref|XP_002276606.1| PREDICTED: probable serine/threonine-protein kinase At1g54610
           [Vitis vinifera]
          Length = 575

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/60 (53%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
 Frame = -2

Query: 484 GSPHYMDPAFDPPDVTFSSKIFTYQKEPVQNLSGRLVDPATI---------VGLGHLSSK 332
           GS H++DP FDPPDV FSS  FTY K P+Q  SG LVDPA +          G GH  SK
Sbjct: 496 GSSHHLDPVFDPPDVPFSSSNFTYSKAPIQTWSGPLVDPAAVGAPRRKKYMAGDGHAQSK 555


>emb|CBI26114.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -2

Query: 484 GSPHYMDPAFDPPDVTFSSKIFTYQKEPVQNLSGRLVDPATI 359
           GS H++DP FDPPDV FSS  FTY K P+Q  SG LVDPA +
Sbjct: 496 GSSHHLDPVFDPPDVPFSSSNFTYSKAPIQTWSGPLVDPAAV 537


>ref|XP_002328382.1| predicted protein [Populus trichocarpa] gi|222838097|gb|EEE76462.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -2

Query: 484 GSPHYMDPAFDPPDVTFSSKIFTYQKEPVQNLSGRLVDPATI 359
           GS H++DPA  PPDV FS+  FTY KEP+Q  SG LVDPA +
Sbjct: 418 GSSHHIDPALVPPDVPFSTTSFTYSKEPIQTWSGPLVDPAGV 459


>ref|XP_002512278.1| Serine/threonine-protein kinase cdk9, putative [Ricinus communis]
           gi|223548239|gb|EEF49730.1| Serine/threonine-protein
           kinase cdk9, putative [Ricinus communis]
          Length = 571

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -2

Query: 484 GSPHYMDPAFDPPDVTFSSKIFTYQKEPVQNLSGRLVDPATIVG 353
           G+  ++DPAF PPDV +SS  FTY KEPVQ  SG L+DPA+  G
Sbjct: 502 GASQHIDPAFVPPDVPYSSTSFTYSKEPVQTWSGPLIDPASAGG 545


>ref|XP_002516867.1| ATP binding protein, putative [Ricinus communis]
           gi|223543955|gb|EEF45481.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 564

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -2

Query: 484 GSPHYMDPAFDPPDVTFSSKIFTYQKEPVQNLSGRLVDPATI 359
           GS H++DP FDPPDV FSS  F+Y K  +Q  SG L+DPA +
Sbjct: 474 GSSHHIDPVFDPPDVPFSSTNFSYSKAHIQTWSGPLMDPAAV 515


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