BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00036471
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   244   7e-63
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   236   2e-60
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   236   2e-60
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...   231   5e-59
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59

>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Glycine max]
          Length = 986

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/150 (76%), Positives = 133/150 (88%)
 Frame = -3

Query: 451  GRAGRLDEAVKLIKGTPMEHSPIVWVALLSACRIHANVELGEYAAERLIELDADYDGSYT 272
            GRAGRL EA+KLI   PME +P+VWVALLSACR+H+NVELGE+AA RL+EL++  DGSYT
Sbjct: 762  GRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYT 821

Query: 271  LLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTASFFAGDRSHPLSQEIYE 92
            LLSNIYA+A RWKDVARIR  MKRTG+KKRPGCSW+QG+KG A+F+ GDRSHP SQ+IYE
Sbjct: 822  LLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYE 881

Query: 91   FLGDLIRRIKVIGYVPQTSFALHDVDEEEK 2
             L DLI+RIK IGYVPQTSFALHDVD+EEK
Sbjct: 882  TLADLIQRIKAIGYVPQTSFALHDVDDEEK 911


>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Vitis vinifera]
          Length = 852

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/151 (73%), Positives = 133/151 (88%)
 Frame = -3

Query: 454  LGRAGRLDEAVKLIKGTPMEHSPIVWVALLSACRIHANVELGEYAAERLIELDADYDGSY 275
            L RAGRLDEA++LI+G PM+ +P VWVALLSACR++ANVELGEYAA +L+EL++  DGSY
Sbjct: 627  LSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSY 686

Query: 274  TLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTASFFAGDRSHPLSQEIY 95
            TLLSNIYA+A  WKDVARIR LMK TG+KKRPGCSWVQG+KGTA+FFAGD SHP+SQ+IY
Sbjct: 687  TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 746

Query: 94   EFLGDLIRRIKVIGYVPQTSFALHDVDEEEK 2
            + L DL++RIK +GYVP   FALHDVD+EEK
Sbjct: 747  DLLRDLMQRIKALGYVPDNRFALHDVDDEEK 777


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  236 bits (601), Expect = 2e-60
 Identities = 111/151 (73%), Positives = 133/151 (88%)
 Frame = -3

Query: 454  LGRAGRLDEAVKLIKGTPMEHSPIVWVALLSACRIHANVELGEYAAERLIELDADYDGSY 275
            L RAGRLDEA++LI+G PM+ +P VWVALLSACR++ANVELGEYAA +L+EL++  DGSY
Sbjct: 646  LSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSY 705

Query: 274  TLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTASFFAGDRSHPLSQEIY 95
            TLLSNIYA+A  WKDVARIR LMK TG+KKRPGCSWVQG+KGTA+FFAGD SHP+SQ+IY
Sbjct: 706  TLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIY 765

Query: 94   EFLGDLIRRIKVIGYVPQTSFALHDVDEEEK 2
            + L DL++RIK +GYVP   FALHDVD+EEK
Sbjct: 766  DLLRDLMQRIKALGYVPDNRFALHDVDDEEK 796


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cucumis sativus] gi|449479088|ref|XP_004155501.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  231 bits (589), Expect = 5e-59
 Identities = 111/151 (73%), Positives = 130/151 (86%)
 Frame = -3

Query: 454  LGRAGRLDEAVKLIKGTPMEHSPIVWVALLSACRIHANVELGEYAAERLIELDADYDGSY 275
            LGRAGRL+EA++LIK   ME + +VWVALLSA RIHAN+ELGEYAA +L EL A+ DGSY
Sbjct: 630  LGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSY 689

Query: 274  TLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTASFFAGDRSHPLSQEIY 95
            TLLSN+YA+A RWKDVARIR LMK TG++KRPGCSW+QGKK T +FF GDRSHP S++IY
Sbjct: 690  TLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIY 749

Query: 94   EFLGDLIRRIKVIGYVPQTSFALHDVDEEEK 2
              L DLI+RIK +GYVPQTSFALHDVD+EEK
Sbjct: 750  NLLLDLIKRIKDMGYVPQTSFALHDVDDEEK 780


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  231 bits (588), Expect = 6e-59
 Identities = 108/151 (71%), Positives = 134/151 (88%)
 Frame = -3

Query: 454 LGRAGRLDEAVKLIKGTPMEHSPIVWVALLSACRIHANVELGEYAAERLIELDADYDGSY 275
           LGRAGRL+EA++LI+G  ME S IVWVALLS CRIHANVELGE+AA++L+EL+++ DGSY
Sbjct: 314 LGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSY 373

Query: 274 TLLSNIYASAGRWKDVARIRLLMKRTGVKKRPGCSWVQGKKGTASFFAGDRSHPLSQEIY 95
           TLLSNIYA+A RWKDVAR+R LMK +G++KRPGCSWVQGKKGT +F+  D++HP S++IY
Sbjct: 374 TLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIY 433

Query: 94  EFLGDLIRRIKVIGYVPQTSFALHDVDEEEK 2
           E L  L +RIKV+GYVP+TSFALHDVD+EEK
Sbjct: 434 EILRSLTQRIKVLGYVPETSFALHDVDDEEK 464